2dcg: Difference between revisions

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==MOLECULAR STRUCTURE OF A LEFT-HANDED DOUBLE HELICAL DNA FRAGMENT AT ATOMIC RESOLUTION==
==MOLECULAR STRUCTURE OF A LEFT-HANDED DOUBLE HELICAL DNA FRAGMENT AT ATOMIC RESOLUTION==
<StructureSection load='2dcg' size='340' side='right' caption='[[2dcg]], [[Resolution|resolution]] 0.90&Aring;' scene=''>
<StructureSection load='2dcg' size='340' side='right' caption='[[2dcg]], [[Resolution|resolution]] 0.90&Aring;' scene=''>
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<table><tr><td colspan='2'>[[2dcg]] is a 2 chain structure. The November 2001 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''DNA''  by David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2001_11 10.2210/rcsb_pdb/mom_2001_11]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DCG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DCG FirstGlance]. <br>
<table><tr><td colspan='2'>[[2dcg]] is a 2 chain structure. The November 2001 RCSB PDB [http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''DNA''  by David S. Goodsell is [http://dx.doi.org/10.2210/rcsb_pdb/mom_2001_11 10.2210/rcsb_pdb/mom_2001_11]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DCG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2DCG FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SPM:SPERMINE'>SPM</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SPM:SPERMINE'>SPM</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dcg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dcg OCA], [http://pdbe.org/2dcg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dcg RCSB], [http://www.ebi.ac.uk/pdbsum/2dcg PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dcg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dcg OCA], [http://pdbe.org/2dcg PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dcg RCSB], [http://www.ebi.ac.uk/pdbsum/2dcg PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2dcg ProSAT]</span></td></tr>
</table>
</table>
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<div style="background-color:#fffaf0;">

Revision as of 09:13, 30 May 2018

MOLECULAR STRUCTURE OF A LEFT-HANDED DOUBLE HELICAL DNA FRAGMENT AT ATOMIC RESOLUTIONMOLECULAR STRUCTURE OF A LEFT-HANDED DOUBLE HELICAL DNA FRAGMENT AT ATOMIC RESOLUTION

Structural highlights

2dcg is a 2 chain structure. The November 2001 RCSB PDB Molecule of the Month feature on DNA by David S. Goodsell is 10.2210/rcsb_pdb/mom_2001_11. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Publication Abstract from PubMed

The DNA fragment d(CpGpCpGpCpG) crystallises as a left-handed double helical molecule with Watson-Crick base pairs and an antiparallel organisation of the sugar phosphate chains. The helix has two nucleotides in the asymmetric unit and contains twelve base pairs per turn. It differs significantly from right-handed B-DNA.

Molecular structure of a left-handed double helical DNA fragment at atomic resolution.,Wang AH, Quigley GJ, Kolpak FJ, Crawford JL, van Boom JH, van der Marel G, Rich A Nature. 1979 Dec 13;282(5740):680-6. PMID:514347[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Wang AH, Quigley GJ, Kolpak FJ, Crawford JL, van Boom JH, van der Marel G, Rich A. Molecular structure of a left-handed double helical DNA fragment at atomic resolution. Nature. 1979 Dec 13;282(5740):680-6. PMID:514347

2dcg, resolution 0.90Å

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