2dpu: Difference between revisions

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==Crystal structure of the replication termination protein in complex with a pseudosymmetric 21mer B-site DNA==
==Crystal structure of the replication termination protein in complex with a pseudosymmetric 21mer B-site DNA==
<StructureSection load='2dpu' size='340' side='right' caption='[[2dpu]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
<StructureSection load='2dpu' size='340' side='right' caption='[[2dpu]], [[Resolution|resolution]] 3.10&Aring;' scene=''>
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</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1bm9|1bm9]], [[1j0r|1j0r]], [[1f4k|1f4k]], [[2dpd|2dpd]]</td></tr>
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1bm9|1bm9]], [[1j0r|1j0r]], [[1f4k|1f4k]], [[2dpd|2dpd]]</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rtp ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Bacillus globigii" Migula 1900])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">rtp ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1423 "Bacillus globigii" Migula 1900])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dpu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dpu OCA], [http://pdbe.org/2dpu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dpu RCSB], [http://www.ebi.ac.uk/pdbsum/2dpu PDBsum]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2dpu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dpu OCA], [http://pdbe.org/2dpu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2dpu RCSB], [http://www.ebi.ac.uk/pdbsum/2dpu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2dpu ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
[[http://www.uniprot.org/uniprot/RTP_BACSU RTP_BACSU]] Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat.  
[[http://www.uniprot.org/uniprot/RTP_BACSU RTP_BACSU]] Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat.  
==See Also==
*[[Replication Termination Protein|Replication Termination Protein]]
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</StructureSection>
</StructureSection>

Revision as of 12:23, 12 October 2017

Crystal structure of the replication termination protein in complex with a pseudosymmetric 21mer B-site DNACrystal structure of the replication termination protein in complex with a pseudosymmetric 21mer B-site DNA

Structural highlights

2dpu is a 3 chain structure with sequence from "bacillus_globigii"_migula_1900 "bacillus globigii" migula 1900. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Gene:rtp ("Bacillus globigii" Migula 1900)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

[RTP_BACSU] Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat.

2dpu, resolution 3.10Å

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OCA