5d1c: Difference between revisions

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-'''Unreleased structure'''
+==Crystal structure of D233G-Y306F HDAC8 in complex with a tetrapeptide substrate==
+<StructureSection load='5d1c' size='340' side='right' caption='[[5d1c]], [[Resolution|resolution]] 1.42&Aring;' scene=''>
-The entry 5d1c is ON HOLD  until Paper Publication
+== Structural highlights ==
+<table><tr><td colspan='2'>[[5d1c]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5D1C OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5D1C FirstGlance]. <br>
-Authors: Decroos, C., Christianson, N.H., Gullett, L.E., Bowman, C.M., Christianson, K.E., Deardorff, M.A., Christianson, D.W.
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=ALY:N(6)-ACETYLLYSINE'>ALY</scene>, <scene name='pdbligand=MCM:7-AMINO-4-METHYL-CHROMEN-2-ONE'>MCM</scene></td></tr>
-Description: Crystal structure of D233G-Y306F HDAC8 in complex with a tetrapeptide substrate
+<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5d1b|5d1b]], [[5d1d|5d1d]]</td></tr>
-[[Category: Unreleased Structures]]
+<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Histone_deacetylase Histone deacetylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.98 3.5.1.98] </span></td></tr>
-[[Category: Christianson, K.E]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5d1c FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5d1c OCA], [http://pdbe.org/5d1c PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5d1c RCSB], [http://www.ebi.ac.uk/pdbsum/5d1c PDBsum]</span></td></tr>
+</table>
+== Function ==
+[[http://www.uniprot.org/uniprot/HDAC8_HUMAN HDAC8_HUMAN]] Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes. May play a role in smooth muscle cell contractility.<ref>PMID:10748112</ref> <ref>PMID:10926844</ref> <ref>PMID:10922473</ref> <ref>PMID:14701748</ref>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Histone deacetylase]]
+[[Category: Bowman, C M]]
+[[Category: Christianson, D W]]
+[[Category: Christianson, K E]]
+[[Category: Christianson, N H]]
+[[Category: Deardorff, M A]]
 [[Category: Decroos, C]]
-[[Category: Deardorff, M.A]]
+[[Category: Gullett, L E]]
-[[Category: Bowman, C.M]]
+[[Category: Arginase/deacetylase fold]]
-[[Category: Christianson, D.W]]
+[[Category: Enzyme substrate complex]]
-[[Category: Gullett, L.E]]
+[[Category: Hydrolase]]
-[[Category: Christianson, N.H]]