Thioesterase: Difference between revisions

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Michal Harel (talk | contribs)
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Line 70: Line 70:
**[[2qq2]] - hTE7 C terminal<br />
**[[2qq2]] - hTE7 C terminal<br />
**[[3fo5]] – hTE11 START domain<br />
**[[3fo5]] – hTE11 START domain<br />
**[[3b7k]] – hTE12<br />
**[[3b7k]], [[4moc]] – hTE12<br />
**[[4mob]] – hTE12 + ADP<br />
**[[3rd7]] – TE – ''Mycobacterium avium''<br />
**[[3rd7]] – TE – ''Mycobacterium avium''<br />
**[[3u0a]] – TEII – ''Mycobacterium marinum''<br />
**[[3u0a]] – TEII – ''Mycobacterium marinum''<br />
**[[1tbu]] – TE N terminal (peroximal) – yeast
**[[1tbu]] – TE N terminal (peroximal) – yeast<br />
**[[4qfw]] – YpTE II – ''Yersinia pestis''<br />
**[[4r4u]] – YpTE II + CoA<br />


*Acyl protein thioesterase
*Acyl protein thioesterase
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**[[2ess]] – TE – ''Bacterioides thetaiotaomicron''<br />
**[[2ess]] – TE – ''Bacterioides thetaiotaomicron''<br />
**[[4gak]] – TE – ''Spirosoma linguale''<br />
**[[4gak]] – TE – ''Spirosoma linguale''<br />
**[[4gwh]] – TE – ''Yersinia pestis''<br />
**[[4gwh]] – YpTE <br />


*ACP-polyene thioesterase
*ACP-polyene thioesterase
Line 102: Line 105:


**[[4k00]] – TE – ''Synechocystis''<br />
**[[4k00]] – TE – ''Synechocystis''<br />
**[[4k02]] – TE – ''Arabidopsis thaliana''<br />
**[[4k02]] – AtTE – ''Arabidopsis thaliana''<br />


*RedJ thioesterase
*RedJ thioesterase
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**[[2ylm]] – hUSP C terminal domain <br />
**[[2ylm]] – hUSP C terminal domain <br />
**[[2f1x]], [[2f1y]], [[2foj]], [[2foo]], [[2fop]] – hUSP N terminal domain/peptide <br />
**[[2f1x]], [[2f1y]], [[2foj]], [[2foo]], [[2fop]] – hUSP N terminal domain/peptide <br />
**[[4zv3]] – mUSP N terminal domain <br />


*Ubiquitin thioesterase 7 complexes
*Ubiquitin thioesterase 7 complexes
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**[[4jjq]] – hUSP TRAF domain + E2 peptide<br />
**[[4jjq]] – hUSP TRAF domain + E2 peptide<br />
**[[4kg9]] – hUSP TRAF domain + MCM-BP peptide<br />
**[[4kg9]] – hUSP TRAF domain + MCM-BP peptide<br />
**[[4yoc]] – hUSP residues 560-1102 + DNA methyl transferase<br />


*Ubiquitin thioesterase 8
*Ubiquitin thioesterase 8
Line 190: Line 195:
**[[2ayn]] – hUSP<br />
**[[2ayn]] – hUSP<br />
**[[2ayo]] – hUSP + Ub aldehyde<br />
**[[2ayo]] – hUSP + Ub aldehyde<br />
**[[1wiv]] – AtUSP UBA domain - NMR<br />


*Ubiquitin thioesterase 15
*Ubiquitin thioesterase 15
Line 222: Line 228:
**[[3ihr]] – hUSP (mutant)  <BR />
**[[3ihr]] – hUSP (mutant)  <BR />
**[[3a7s]] – hUSP catalytic domain (mutant)  <BR />
**[[3a7s]] – hUSP catalytic domain (mutant)  <BR />
**[[3u12]] – hUSP pleckstrin domain <br />
*USP 38
**[[4rxx]] – hUSP N terminal  <BR />


*Ubiquitin thioesterase Cyld
*Ubiquitin thioesterase Cyld
Line 248: Line 259:
**[[3tb3]] – hUSP UCH domain (mutant)  <BR />
**[[3tb3]] – hUSP UCH domain (mutant)  <BR />
**[[3ihr]] – hUSP-L5 (mutant)  <br />
**[[3ihr]] – hUSP-L5 (mutant)  <br />
**[[4uel]] – hUSP-L5 + polyUb + proteasomal Ub receptor Deubad domain  <br />
**[[4uem]] – hUSP-L5 + proteasomal Ub receptor Deubad domain  <br />
**[[4wlq]] – mUSP-L5 + proteasomal Ub receptor C terminal  <br />
**[[4wlr]] – mUSP-L5 + polyUb + proteasomal Ub receptor C terminal  <br />
**[[4uf5]], [[4wlp]] – hUSP-L5 + nuclear factor Deubad domain  <br />
**[[4uf6]] – hUSP-L5 + polyUb + nuclear factor Deubad domain  <br />


*Ubiquitin thioesterase ZranB1
*Ubiquitin thioesterase ZranB1


**[[3zrh]] – hUSP  <BR />
**[[3zrh]] – hUSP  <BR />
**[[4s1z]] – bUSP  zinc finger + Ub <BR />


*Ubiquitin thioesterase OTUB1
*Ubiquitin thioesterase OTUB1
Line 258: Line 276:
**[[4ddg]], [[4ddi]] – hUSP + Ub<BR />
**[[4ddg]], [[4ddi]] – hUSP + Ub<BR />
**[[4i6l]] – hUSP (mutant) + Ub<BR />
**[[4i6l]] – hUSP (mutant) + Ub<BR />
**[[4dhz]] – hUSP + E2 + Ub<BR />
**[[4dhz]], [[4ldt]] – hUSP + E2 + Ub<BR />
**[[4boq]] - hUSP OTU domain <BR />
**[[4boq]] - hUSP OTU domain <BR />
**[[4boz]] - hUSP OTU domain (mutant) + Ub <BR />
**[[4boz]] - hUSP OTU domain (mutant) + Ub <BR />
Line 272: Line 290:


**[[3znh]] – USP OTU domain + Ub – Crimean-Congo hemorrhagic fever virus<BR />
**[[3znh]] – USP OTU domain + Ub – Crimean-Congo hemorrhagic fever virus<BR />
*Pseudomonas aeruginosa TE
**[[2av9]], [[2o5u]], [[2o6b]], [[2o6t]], [[2o6u]], [[3qy3]] – PaTE – Pseudomonas aeruginosa
**[[4qd7]] – PaTE hotdog domain<br />
**[[4qda]], [[4qdb]] – PaTE hotdog domain (mutant)<br />
**[[4qd8]], [[4dq9]] – PaTE hotdog domain + acyl-CoA derivatives<br />


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[[Category:Topic Page]]
[[Category:Topic Page]]

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Alexander Berchansky, Joel L. Sussman