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==X-ray crystallographic structure of the oxidised form perdeuterated Pyrococcus furiosus rubredoxin in D2O at 295K (in quartz capillary) to 1.00 Angstom resolution.== | ==X-ray crystallographic structure of the oxidised form perdeuterated Pyrococcus furiosus rubredoxin in D2O at 295K (in quartz capillary) to 1.00 Angstom resolution.== | ||
<StructureSection load='4ar5' size='340' side='right' caption='[[4ar5]], [[Resolution|resolution]] 1.00Å' scene=''> | <StructureSection load='4ar5' size='340' side='right' caption='[[4ar5]], [[Resolution|resolution]] 1.00Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[4ar5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/ | <table><tr><td colspan='2'>[[4ar5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43587 Atcc 43587]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AR5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4AR5 FirstGlance]. <br> | ||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DOD:DEUTERATED+WATER'>DOD</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr> | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DOD:DEUTERATED+WATER'>DOD</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene></td></tr> | ||
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1bq8|1bq8]], [[1bq9|1bq9]], [[1brf|1brf]], [[1caa|1caa]], [[1cad|1cad]], [[1iu5|1iu5]], [[1iu6|1iu6]], [[1qcv|1qcv]], [[1rwd|1rwd]], [[1vcx|1vcx]], [[1zrp|1zrp]], [[4ar3|4ar3]], [[4ar4|4ar4]], [[4ar6|4ar6]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1bq8|1bq8]], [[1bq9|1bq9]], [[1brf|1brf]], [[1caa|1caa]], [[1cad|1cad]], [[1iu5|1iu5]], [[1iu6|1iu6]], [[1qcv|1qcv]], [[1rwd|1rwd]], [[1vcx|1vcx]], [[1zrp|1zrp]], [[4ar3|4ar3]], [[4ar4|4ar4]], [[4ar6|4ar6]]</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ar5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ar5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ar5 RCSB], [http://www.ebi.ac.uk/pdbsum/4ar5 PDBsum]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ar5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ar5 OCA], [http://pdbe.org/4ar5 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4ar5 RCSB], [http://www.ebi.ac.uk/pdbsum/4ar5 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=4ar5 ProSAT]</span></td></tr> | ||
</table> | </table> | ||
== Function == | == Function == | ||
| Line 17: | Line 18: | ||
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | ||
</div> | </div> | ||
<div class="pdbe-citations 4ar5" style="background-color:#fffaf0;"></div> | |||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: | [[Category: Atcc 43587]] | ||
[[Category: Blakeley, M P]] | [[Category: Blakeley, M P]] | ||
[[Category: Cuypers, M G]] | [[Category: Cuypers, M G]] | ||
Revision as of 17:27, 5 August 2016
X-ray crystallographic structure of the oxidised form perdeuterated Pyrococcus furiosus rubredoxin in D2O at 295K (in quartz capillary) to 1.00 Angstom resolution.X-ray crystallographic structure of the oxidised form perdeuterated Pyrococcus furiosus rubredoxin in D2O at 295K (in quartz capillary) to 1.00 Angstom resolution.
Structural highlights
Function[RUBR_PYRFU] Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule. Publication Abstract from PubMedNeutron crystallographic analyses at near-atomic resolution are presented for both reduced and oxidized forms of perdeuterated Pyrococcus furiosus rubredoxin, a small iron-sulfur redox protein with remarkable thermostability. Hydronium ions may play a key role in the protonation and charge-transfer processes associated with the oxidized and reduced forms of the protein. Picture: overall structure showing D(3) O(+) ions (red and gray molecules). Near-Atomic Resolution Neutron Crystallography on Perdeuterated Pyrococcus furiosus Rubredoxin: Implication of Hydronium Ions and Protonation State Equilibria in Redox Changes.,Cuypers MG, Mason SA, Blakeley MP, Mitchell EP, Haertlein M, Forsyth VT Angew Chem Int Ed Engl. 2013 Jan 14;52(3):1022-5. doi: 10.1002/anie.201207071., Epub 2012 Dec 6. PMID:23225503[1] From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine. References
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