4u63: Difference between revisions

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'''Unreleased structure'''
==Crystal structure of a bacterial class III photolyase from Agrobacterium tumefaciens at 1.67A resolution==
 
<StructureSection load='4u63' size='340' side='right' caption='[[4u63]], [[Resolution|resolution]] 1.67&Aring;' scene=''>
The entry 4u63 is ON HOLD  until Paper Publication
== Structural highlights ==
 
<table><tr><td colspan='2'>[[4u63]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4U63 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4U63 FirstGlance]. <br>
Authors: Scheerer, P., Zhang, F., Kalms, J., von Stetten, D., Krauss, N., Oberpichler, I., Lamparter, T.
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FAD:FLAVIN-ADENINE+DINUCLEOTIDE'>FAD</scene>, <scene name='pdbligand=MHF:5,10-METHENYL-6,7,8-TRIHYDROFOLIC+ACID'>MHF</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene></td></tr>
 
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4u63 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4u63 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4u63 RCSB], [http://www.ebi.ac.uk/pdbsum/4u63 PDBsum]</span></td></tr>
Description: Crystal structure of a bacterial class III photolyase from Agrobacterium tumefaciens at 1.67A resolution
</table>
[[Category: Unreleased Structures]]
== Function ==
[[http://www.uniprot.org/uniprot/PHRA_AGRT5 PHRA_AGRT5]] Photolyase involved in the repair of UV radiation-induced DNA damage. By using blue-light energy, catalyzes the photoreactivation of cyclobutane pyrimidine dimers (CPDs), which are formed between adjacent bases on the same DNA strand upon exposure to ultraviolet radiation. Can repair CPD lesions in ssDNA as well as in dsDNA.<ref>PMID:22066008</ref> 
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Kalms, J]]
[[Category: Krauss, N]]
[[Category: Krauss, N]]
[[Category: Von Stetten, D]]
[[Category: Lamparter, T]]
[[Category: Oberpichler, I]]
[[Category: Oberpichler, I]]
[[Category: Scheerer, P]]
[[Category: Scheerer, P]]
[[Category: Stetten, D von]]
[[Category: Zhang, F]]
[[Category: Zhang, F]]
[[Category: Lamparter, T]]
[[Category: Agrobacterium tumefacien]]
[[Category: Kalms, J]]
[[Category: Cyclopyrimidine dimer]]
[[Category: Dna]]
[[Category: Dna damage]]
[[Category: Dna repair]]
[[Category: Double-stranded]]
[[Category: Fad]]
[[Category: Flavin]]
[[Category: Flavoprotein]]
[[Category: Lyase]]
[[Category: Methenyltetrahydrofolate]]
[[Category: Photolyase]]
[[Category: Photoreduction]]
[[Category: Trp triade]]
[[Category: Ultraviolet ray]]

Revision as of 17:11, 26 March 2015

Crystal structure of a bacterial class III photolyase from Agrobacterium tumefaciens at 1.67A resolutionCrystal structure of a bacterial class III photolyase from Agrobacterium tumefaciens at 1.67A resolution

Structural highlights

4u63 is a 1 chain structure. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, , ,
Resources:FirstGlance, OCA, RCSB, PDBsum

Function

[PHRA_AGRT5] Photolyase involved in the repair of UV radiation-induced DNA damage. By using blue-light energy, catalyzes the photoreactivation of cyclobutane pyrimidine dimers (CPDs), which are formed between adjacent bases on the same DNA strand upon exposure to ultraviolet radiation. Can repair CPD lesions in ssDNA as well as in dsDNA.[1]

References

  1. Oberpichler I, Pierik AJ, Wesslowski J, Pokorny R, Rosen R, Vugman M, Zhang F, Neubauer O, Ron EZ, Batschauer A, Lamparter T. A photolyase-like protein from Agrobacterium tumefaciens with an iron-sulfur cluster. PLoS One. 2011;6(10):e26775. doi: 10.1371/journal.pone.0026775. Epub 2011 Oct 31. PMID:22066008 doi:http://dx.doi.org/10.1371/journal.pone.0026775

4u63, resolution 1.67Å

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