Aminoacyl tRNA Synthetase: Difference between revisions
Michal Harel (talk | contribs) No edit summary |
Michal Harel (talk | contribs) No edit summary |
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*'''Class I aaRS''' | *'''Class I aaRS''' | ||
*Arg-RS | *'''Arg-RS''' | ||
**[[1bs2]] – yArgRS<br /> | **[[1bs2]] – yArgRS<br /> | ||
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**[[2zue]] – PhArgRS + Arg-tRNA + ATP analog | **[[2zue]] – PhArgRS + Arg-tRNA + ATP analog | ||
*Cys-RS | *'''Cys-RS''' | ||
**[[1li5]] - EcCysRS - ''Escherichia coli''<br /> | **[[1li5]] - EcCysRS - ''Escherichia coli''<br /> | ||
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**[[1u0b]] – EcCysRS + Cys-tRNA | **[[1u0b]] – EcCysRS + Cys-tRNA | ||
*Gln-RS | *'''Gln-RS''' | ||
**[[1nyl]]– EcGlnRS<br /> | **[[1nyl]]– EcGlnRS<br /> | ||
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**[[1exd]] - EcGlnRS + Gln-tRNA (mutant) + AMP | **[[1exd]] - EcGlnRS + Gln-tRNA (mutant) + AMP | ||
*Glu-RS | *'''Glu-RS''' | ||
**[[1gln]] – TtGluRS<br /> | **[[1gln]] – TtGluRS<br /> | ||
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**[[2hrk]], [[ 2hsm]] - yGluRS N-terminal + GU4 nucleic-binding protein 1 | **[[2hrk]], [[ 2hsm]] - yGluRS N-terminal + GU4 nucleic-binding protein 1 | ||
*Ile-RS | *'''Ile-RS''' | ||
**[[1ile]] - TtIleRS<br /> | **[[1ile]] - TtIleRS<br /> | ||
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**[[1ffy]], [[ 1qu2]], [[ 1qu3]] - SaIleRS + Ile-tRNA + antibiotic - ''Staphylococcus aureus'' | **[[1ffy]], [[ 1qu2]], [[ 1qu3]] - SaIleRS + Ile-tRNA + antibiotic - ''Staphylococcus aureus'' | ||
*Leu-RS | *'''Leu-RS''' | ||
**[[3o0a]] – AaLeuRS hydrolytic domain – ''Aquifex aeolicus''<br />[[2wfd]] – hLeuRS editing domain – human<br /> | **[[3o0a]] – AaLeuRS hydrolytic domain – ''Aquifex aeolicus''<br />[[2wfd]] – hLeuRS editing domain – human<br /> | ||
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**[[2bte]], [[ 2byt]] - TtLeuRS + Leu-tRNA + Leu | **[[2bte]], [[ 2byt]] - TtLeuRS + Leu-tRNA + Leu | ||
*Lys-RS | *'''Lys-RS''' | ||
**[[1irx]] – PhLysRS<br /> | **[[1irx]] – PhLysRS<br /> | ||
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**[[1e24]] - EcLysRS + Lys + ATP | **[[1e24]] - EcLysRS + Lys + ATP | ||
*'' | *''Lys-RS + tRNA''<br /> | ||
**[[2zni]], [[2znj]] – DhLysRS + tRNA | **[[2zni]], [[2znj]] – DhLysRS + tRNA | ||
*Met-RS | *'''Met-RS''' | ||
**[[1a8h]] – TtMetRS<br /> | **[[1a8h]] – TtMetRS<br /> | ||
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**[[2hsn]] - yMetRS N-terminal + GU4 nucleic-binding protein 1 N-terminal | **[[2hsn]] - yMetRS N-terminal + GU4 nucleic-binding protein 1 N-terminal | ||
*Trp-RS | *'''Trp-RS''' | ||
**[[1d2r]] - GsTrpRS<br /> | **[[1d2r]] - GsTrpRS<br /> | ||
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**[[2ake]], [[2dr2]] - hTrpRS + Trp-tRNA | **[[2ake]], [[2dr2]] - hTrpRS + Trp-tRNA | ||
*Tyr-RS | *'''Tyr-RS''' | ||
**[[1tya]], [[ 1tyb]], [[ 1tyc]], [[ 1tyd]], [[ 2ts1]] – GsTyrRS<br /> | **[[1tya]], [[ 1tyb]], [[ 1tyc]], [[ 1tyd]], [[ 2ts1]] – GsTyrRS<br /> | ||
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**[[2rkj]] – NcTyrRS + RNA | **[[2rkj]] – NcTyrRS + RNA | ||
*Val-RS | *'''Val-RS''' | ||
**[[1iyw]] - TtValRS<br /> | **[[1iyw]] - TtValRS<br /> | ||
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*'''Class II aaRS''' | *'''Class II aaRS''' | ||
*Ala-RS | *'''Ala-RS''' | ||
**[[3g98]] – AaAlaRS residues 758-867<br /> | **[[3g98]] – AaAlaRS residues 758-867<br /> | ||
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**[[2ztg]] – AfAlaRS + Ala-SA<br /> | **[[2ztg]] – AfAlaRS + Ala-SA<br /> | ||
*Asp-RS | *'''Asp-RS''' | ||
**[[3nen]], [[1b8a]] – TkAspRS - ''Thermococcus kodakarensis''<br /> | **[[3nen]], [[1b8a]] – TkAspRS - ''Thermococcus kodakarensis''<br /> | ||
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**[[1wyd]] – AspRS – ''Sulfolobus tokodaii''<br /> | **[[1wyd]] – AspRS – ''Sulfolobus tokodaii''<br /> | ||
**[[1eov]] - yAspRS<br /> | **[[1eov]] - yAspRS<br /> | ||
[[1n9w]], [[1l0w]], [[1g51]] – TtAspRS<br /> | **[[1n9w]], [[1l0w]], [[1g51]] – TtAspRS<br /> | ||
**[[1eqr]] – EcAspRS | **[[1eqr]] – EcAspRS | ||
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**[[1il2]], [[1c0a]] – EcAspRS + Asp-tRNA + Asp-adenylate | **[[1il2]], [[1c0a]] – EcAspRS + Asp-tRNA + Asp-adenylate | ||
*Asn-RS | *'''Asn-RS''' | ||
**[[1x56]] - PhAsnRS <br /> | **[[1x56]] - PhAsnRS <br /> | ||
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**[[12as]] - EcAsnRS + Asn + AMP | **[[12as]] - EcAsnRS + Asn + AMP | ||
*Gly-RS | *'''Gly-RS''' | ||
**[[1ati]] – TtGlyRS<br /> | **[[1ati]] – TtGlyRS<br /> | ||
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**[[1ggm]] – TtGlyRS + Gly-adenylate | **[[1ggm]] – TtGlyRS + Gly-adenylate | ||
*His-RS | *'''His-RS''' | ||
**[[3net]] – HisRS – Nostoc<br /> | **[[3net]] – HisRS – Nostoc<br /> | ||
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**[[1kmn]] - EcHisRS + His-ol + ATP | **[[1kmn]] - EcHisRS + His-ol + ATP | ||
*Phe-RS | *'''Phe-RS''' | ||
**[[1pys]] – TtPheRS<br /> | **[[1pys]] – TtPheRS<br /> | ||
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**[[2iy5]] - TtPheRS α+β chains + Phe-ol + Phe-tRNA | **[[2iy5]] - TtPheRS α+β chains + Phe-ol + Phe-tRNA | ||
*Pro-RS | *'''Pro-RS''' | ||
**[[1hc7]] – TtProRS<br /> | **[[1hc7]] – TtProRS<br /> | ||
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**[[1h4s]] - TtProRS + Pro-tRNA + Pro-SA<br /> | **[[1h4s]] - TtProRS + Pro-tRNA + Pro-SA<br /> | ||
*Ser-RS | *'''Ser-RS''' | ||
**[[3lsq]] – TbSerRS<br /> | **[[3lsq]] – TbSerRS<br /> | ||
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**[[2du5]], [[2du6]] - AfSerRS (mutant) + Cys-tRNA + phosphoserine | **[[2du5]], [[2du6]] - AfSerRS (mutant) + Cys-tRNA + phosphoserine | ||
*Thr-RS | *'''Thr-RS''' | ||
**[[1y2q]] - PaThrRS editing domain<br /> | **[[1y2q]] - PaThrRS editing domain<br /> |