3df7: Difference between revisions

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==Crystal structure of a putative ATP-grasp superfamily protein from Archaeoglobus fulgidus==
==Crystal structure of a putative ATP-grasp superfamily protein from Archaeoglobus fulgidus==
<StructureSection load='3df7' size='340' side='right' caption='[[3df7]], [[Resolution|resolution]] 1.87&Aring;' scene=''>
<StructureSection load='3df7' size='340' side='right' caption='[[3df7]], [[Resolution|resolution]] 1.87&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3df7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DF7 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3df7]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arcfl Arcfl]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DF7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DF7 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AF_1061 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2234 Archaeoglobus fulgidus])</td></tr>
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AF_1061 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2234 ARCFL])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3df7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3df7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3df7 RCSB], [http://www.ebi.ac.uk/pdbsum/3df7 PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3df7 TOPSAN]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3df7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3df7 OCA], [http://pdbe.org/3df7 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=3df7 RCSB], [http://www.ebi.ac.uk/pdbsum/3df7 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=3df7 ProSAT], [http://www.topsan.org/Proteins/NYSGXRC/3df7 TOPSAN]</span></td></tr>
</table>
</table>
== Evolutionary Conservation ==
== Evolutionary Conservation ==
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     <text>to colour the structure by Evolutionary Conservation</text>
     <text>to colour the structure by Evolutionary Conservation</text>
   </jmolCheckbox>
   </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3df7 ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
[[Category: Archaeoglobus fulgidus]]
[[Category: Arcfl]]
[[Category: Burley, S K]]
[[Category: Burley, S K]]
[[Category: Structural genomic]]
[[Category: Structural genomic]]
[[Category: Sugadev, R]]
[[Category: Sugadev, R]]
[[Category: Swaminathan, S]]
[[Category: Swaminathan, S]]
[[Category: Archaeoglobus fulgidus]]
[[Category: Atp-grasp superfamily]]
[[Category: Atp-grasp superfamily]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]]

Revision as of 15:20, 11 August 2016

Crystal structure of a putative ATP-grasp superfamily protein from Archaeoglobus fulgidusCrystal structure of a putative ATP-grasp superfamily protein from Archaeoglobus fulgidus

Structural highlights

3df7 is a 1 chain structure with sequence from Arcfl. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Gene:AF_1061 (ARCFL)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3df7, resolution 1.87Å

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OCA