2vmo: Difference between revisions
No edit summary |
No edit summary |
||
| Line 3: | Line 3: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2vmo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VMO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2VMO FirstGlance]. <br> | <table><tr><td colspan='2'>[[2vmo]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VMO OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2VMO FirstGlance]. <br> | ||
</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GLY:GLYCINE'>GLY</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>< | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GLY:GLYCINE'>GLY</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | ||
<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1yjy|1yjy]], [[1kl2|1kl2]], [[2vib|2vib]], [[2vgs|2vgs]], [[1yjz|1yjz]], [[2vgv|2vgv]], [[2vgu|2vgu]], [[1yjs|1yjs]], [[2vi9|2vi9]], [[1kl1|1kl1]], [[2vi8|2vi8]], [[1kkp|1kkp]], [[2vgt|2vgt]], [[2via|2via]], [[1kkj|1kkj]], [[2vgw|2vgw]], [[2vmp|2vmp]], [[2vmr|2vmr]], [[2vmu|2vmu]], [[2vmv|2vmv]], [[2vmq|2vmq]], [[2vms|2vms]], [[2vmt|2vmt]], [[2vmw|2vmw]], [[2vmx|2vmx]], [[2vmn|2vmn]], [[2vmy|2vmy]], [[2vmz|2vmz]]</td></tr> | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1yjy|1yjy]], [[1kl2|1kl2]], [[2vib|2vib]], [[2vgs|2vgs]], [[1yjz|1yjz]], [[2vgv|2vgv]], [[2vgu|2vgu]], [[1yjs|1yjs]], [[2vi9|2vi9]], [[1kl1|1kl1]], [[2vi8|2vi8]], [[1kkp|1kkp]], [[2vgt|2vgt]], [[2via|2via]], [[1kkj|1kkj]], [[2vgw|2vgw]], [[2vmp|2vmp]], [[2vmr|2vmr]], [[2vmu|2vmu]], [[2vmv|2vmv]], [[2vmq|2vmq]], [[2vms|2vms]], [[2vmt|2vmt]], [[2vmw|2vmw]], [[2vmx|2vmx]], [[2vmn|2vmn]], [[2vmy|2vmy]], [[2vmz|2vmz]]</td></tr> | ||
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glycine_hydroxymethyltransferase Glycine hydroxymethyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.2.1 2.1.2.1] </span></td></tr> | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glycine_hydroxymethyltransferase Glycine hydroxymethyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.2.1 2.1.2.1] </span></td></tr> | ||
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vmo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vmo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2vmo RCSB], [http://www.ebi.ac.uk/pdbsum/2vmo PDBsum]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2vmo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vmo OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2vmo RCSB], [http://www.ebi.ac.uk/pdbsum/2vmo PDBsum]</span></td></tr> | ||
<table> | </table> | ||
== Function == | |||
[[http://www.uniprot.org/uniprot/Q7SIB6_BACST Q7SIB6_BACST]] Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism (By similarity).[HAMAP-Rule:MF_00051] Interconversion of serine and glycine (By similarity).[RuleBase:RU000585] | |||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 35: | Line 37: | ||
[[Category: Geobacillus stearothermophilus]] | [[Category: Geobacillus stearothermophilus]] | ||
[[Category: Glycine hydroxymethyltransferase]] | [[Category: Glycine hydroxymethyltransferase]] | ||
[[Category: Bhavani, B S | [[Category: Bhavani, B S]] | ||
[[Category: Bisht, S | [[Category: Bisht, S]] | ||
[[Category: Murthy, M R.N | [[Category: Murthy, M R.N]] | ||
[[Category: Pai, V R | [[Category: Pai, V R]] | ||
[[Category: Rajaram, V | [[Category: Rajaram, V]] | ||
[[Category: Rao, N Appaji | [[Category: Rao, N Appaji]] | ||
[[Category: Savithri, H S | [[Category: Savithri, H S]] | ||
[[Category: Folate binding]] | [[Category: Folate binding]] | ||
[[Category: N341a]] | [[Category: N341a]] | ||