1e9m: Difference between revisions
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|PDB= 1e9m |SIZE=350|CAPTION= <scene name='initialview01'>1e9m</scene>, resolution 2.07Å | |PDB= 1e9m |SIZE=350|CAPTION= <scene name='initialview01'>1e9m</scene>, resolution 2.07Å | ||
|SITE= <scene name='pdbsite=FES:Binding+Site+For+Fes+(Cluster+2+Irons-2+Sulfurs)'>FES</scene> | |SITE= <scene name='pdbsite=FES:Binding+Site+For+Fes+(Cluster+2+Irons-2+Sulfurs)'>FES</scene> | ||
|LIGAND= <scene name='pdbligand=FES:FE2/S2 (INORGANIC) CLUSTER'>FES</scene> | |LIGAND= <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene> | ||
|ACTIVITY= | |ACTIVITY= | ||
|GENE= FDXE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1061 Rhodobacter capsulatus]) | |GENE= FDXE ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1061 Rhodobacter capsulatus]) | ||
|DOMAIN= | |||
|RELATEDENTRY= | |||
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1e9m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e9m OCA], [http://www.ebi.ac.uk/pdbsum/1e9m PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1e9m RCSB]</span> | |||
}} | }} | ||
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[[Category: Sanishvili, N.]] | [[Category: Sanishvili, N.]] | ||
[[Category: Stojanoff, V.]] | [[Category: Stojanoff, V.]] | ||
[[Category: [2fe-2s]]] | [[Category: [2fe-2s]]] | ||
[[Category: bacterium]] | [[Category: bacterium]] | ||
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[[Category: ferredoxin]] | [[Category: ferredoxin]] | ||
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Mar 30 19:58:08 2008'' | ||
Revision as of 19:58, 30 March 2008
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| , resolution 2.07Å | |||||||
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| Sites: | |||||||
| Ligands: | |||||||
| Gene: | FDXE (Rhodobacter capsulatus) | ||||||
| Resources: | FirstGlance, OCA, PDBsum, RCSB | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
FERREDOXIN VI FROM RHODOBACTER CAPSULATUS
OverviewOverview
A [2Fe-2S] ferredoxin found in the photosynthetic bacterium Rhodobacter capsulatus has been purified in recombinant form from Escherichia coli. This protein, called FdVI, resembles ferredoxins involved in iron-sulfur cluster biosynthesis in various prokaryotic and eukaryotic cells. Purified recombinant FdVI was recovered in high yields and appeared to be indistinguishable from the genuine R. capsulatus ferredoxin based on UV-visible absorption and EPR spectroscopy and mass spectrometry. FdVI has been crystallized in the oxidized state by a sitting-drop vapour-diffusion technique using sodium formate as precipitant. Seeding larger drops from a previous hanging-drop-grown small crystal resulted in the formation of long red-brown prismatic needles. Preliminary X-ray diffraction analysis indicated that FdVI crystals are orthorhombic and belong to the space group P2(1)2(1)2(1), with unit-cell parameters a = 45.87, b = 49.83, c = 54.29 A.
About this StructureAbout this Structure
1E9M is a Single protein structure of sequence from Rhodobacter capsulatus. Full crystallographic information is available from OCA.
ReferenceReference
Crystallization and preliminary X-ray diffraction analysis of a [2Fe-2S] ferredoxin (FdVI) from Rhodobacter capsulatus., Armengaud J, Sainz G, Jouanneau Y, Sieker LC, Acta Crystallogr D Biol Crystallogr. 2001 Feb;57(Pt 2):301-3. PMID:11173487 [[Category: [2fe-2s]]]
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