Avidin: Difference between revisions
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{{#tree:id=OrganizedByTopic|openlevels=0| | |||
*Avidin | |||
[[3fdc]], [[2jgs]], [[2c4i]], [[1vyo]], [[1rav]], [[1ave]] – cAv – chicken<br /> | **[[3fdc]], [[2jgs]], [[2c4i]], [[1vyo]], [[1rav]], [[1ave]] – cAv – chicken<br /> | ||
[[2a5b]], [[2a5c]], [[2a8g]] – cAv+deoxyribose<br /> | **[[2a5b]], [[2a5c]], [[2a8g]] – cAv+deoxyribose<br /> | ||
[[1nqn]], [[2cam]] – cAv (mutant)<br /> | **[[1nqn]], [[2cam]] – cAv (mutant)<br /> | ||
[[1ldo]], [[1ldq]], [[1lel]], [[1ij8]], [[1avd]], [[2avi]], [[3vgw]], [[3vhh]], [[3vhi]], [[3vhm]], [[4i60]], [[4jhq]] – cAV + biotin derivative<br /> | **[[1ldo]], [[1ldq]], [[1lel]], [[1ij8]], [[1avd]], [[2avi]], [[3vgw]], [[3vhh]], [[3vhi]], [[3vhm]], [[4i60]], [[4jhq]] – cAV + biotin derivative<br /> | ||
[[3szh]], [[3szi]] – SdAV – ''Shewanella denitrificans''<br /> | **[[3szh]], [[3szi]] – SdAV – ''Shewanella denitrificans''<br /> | ||
[[3t2x]] – SdAV (mutant)<br /> | **[[3t2x]] – SdAV (mutant)<br /> | ||
[[3szj]] – SdAV + biotin<br /> | **[[3szj]] – SdAV + biotin<br /> | ||
[[3t2w]] – SdAV (mutant) + biotin | **[[3t2w]] – SdAV (mutant) + biotin | ||
* Streptavidin | |||
[[2bc3]], [[2iza]], [[2izb]], [[2izc]], [[2izd]], [[2ize]], [[2rta]], [[2rtb]], [[2rtc]], [[3ry1]], [[4gd9]]. [[4gda]], [[4gjs]] - StrAv - ''Streptomyces avidinii''<br /> | **[[2bc3]], [[2iza]], [[2izb]], [[2izc]], [[2izd]], [[2ize]], [[2rta]], [[2rtb]], [[2rtc]], [[3ry1]], [[4gd9]]. [[4gda]], [[4gjs]] - StrAv - ''Streptomyces avidinii''<br /> | ||
[[3mm0]], [[3pk2]], [[3rds]], [[3rdx]], [[3re5]], [[3re6]], [[4gjv]] - StrAv (mutant) <br /> | **[[3mm0]], [[3pk2]], [[3rds]], [[3rdx]], [[3re5]], [[3re6]], [[4gjv]] - StrAv (mutant) <br /> | ||
[[1swa]], [[1swb]], [[1swc]], [[1ry1]] - StrAv core<br /> | **[[1swa]], [[1swb]], [[1swc]], [[1ry1]] - StrAv core<br /> | ||
[[1swh]], [[1swj]], [[1swl]], [[1swo]], [[1swq]], [[1sws]], [[2y3e]], [[3t6l]] - StrAv core (mutant)<br /> | **[[1swh]], [[1swj]], [[1swl]], [[1swo]], [[1swq]], [[1sws]], [[2y3e]], [[3t6l]] - StrAv core (mutant)<br /> | ||
[[4jnj]] – StrAv/rhizavidin<br /> | **[[4jnj]] – StrAv/rhizavidin<br /> | ||
[[4jo6]] – StrAv + SBP-TAG<br /> | **[[4jo6]] – StrAv + SBP-TAG<br /> | ||
''Streptavidin binary complexes'' | *''Streptavidin binary complexes'' | ||
[[1rxh]] – StrAv (mutant)+ biotinyl p-nitroaniline <br /> | **[[1rxh]] – StrAv (mutant)+ biotinyl p-nitroaniline <br /> | ||
[[1rxj]], [[1rxk]], [[1nqm]], [[1kff]], [[1kl4]], [[1luq]], [[1mm9]], [[1moy]], [[1n4j]], [[1n7y]], [[1n9y]], [[1nbx]], [[1swf]], [[1swu]], | [[1rxj]], [[1rxk]], [[1nqm]], [[1kff]], [[1kl4]], [[1luq]], [[1mm9]], [[1moy]], [[1n4j]], [[1n7y]], [[1n9y]], [[1nbx]], [[1swf]], [[1swu]], | ||
[[1kl3]], [[1kl5]] - StrAv (mutant) + strep-tag II peptide<br /> | [[1kl3]], [[1kl5]] - StrAv (mutant) + strep-tag II peptide<br /> | ||
[[1rst]], [[1rsu]] - StrAv + strep-tag II peptide<br /> | **[[1rst]], [[1rsu]] - StrAv + strep-tag II peptide<br /> | ||
[[1df8]], [[1mep]], [[1n43]], [[1n9m]], [[1ndj]], [[1swg]], [[3rdm]], [[3rdo]], [[4ekv]] - StrAv (mutant)+biotin<br /> | **[[1df8]], [[1mep]], [[1n43]], [[1n9m]], [[1ndj]], [[1swg]], [[3rdm]], [[3rdo]], [[4ekv]] - StrAv (mutant)+biotin<br /> | ||
[[1nc9]], [[3rdq]], [[4dne]] - StrAv (mutant)+biotin derivative<br /> | **[[1nc9]], [[3rdq]], [[4dne]] - StrAv (mutant)+biotin derivative<br /> | ||
[[2izl]], [[2rtl]], [[2rtm]], [[2rtn]], [[2rto]], [[2rtp]], [[2rtq]], [[2rtr]] - StrAv +iminobiotin<br /> | **[[2izl]], [[2rtl]], [[2rtm]], [[2rtn]], [[2rto]], [[2rtp]], [[2rtq]], [[2rtr]] - StrAv +iminobiotin<br /> | ||
[[1mk5]], [[1swd]], [[1swe]], [[2f01]], [[2gh7]], [[3ry2]] - StrAv core+biotin<br /> | **[[1mk5]], [[1swd]], [[1swe]], [[2f01]], [[2gh7]], [[3ry2]] - StrAv core+biotin<br /> | ||
[[1swk]], [[1swn]], [[1swp]], [[1swr]], [[1swt]], [[3mg5]], [[2y3f]], [[3t6f]] - StrAv core (mutant) + biotin<br /> | **[[1swk]], [[1swn]], [[1swp]], [[1swr]], [[1swt]], [[3mg5]], [[2y3f]], [[3t6f]] - StrAv core (mutant) + biotin<br /> | ||
[[1stp]], [[2izf]], [[2izg]], [[2izh]], [[2izi]], [[2izj]], [[2rtd]], [[2rte]], [[2rtf]], [[2rtg]] - StrAv +biotin<br /> | **[[1stp]], [[2izf]], [[2izg]], [[2izh]], [[2izi]], [[2izj]], [[2rtd]], [[2rte]], [[2rtf]], [[2rtg]] - StrAv +biotin<br /> | ||
[[3rdu]] - StrAv (mutant) + PEG<br /> | **[[3rdu]] - StrAv (mutant) + PEG<br /> | ||
[[1hqq]], [[1hxl]] – StrAv + MP-2 (mutant)<br /> | **[[1hqq]], [[1hxl]] – StrAv + MP-2 (mutant)<br /> | ||
[[1hy2]] - StrAv + MP-1 <br /> | **[[1hy2]] - StrAv + MP-1 <br /> | ||
[[1hxz]] - StrAv + MP-2<br /> | **[[1hxz]] - StrAv + MP-2<br /> | ||
[[1pts]], [[1sld]], [[1sle]], [[1slg]], [[1str]], [[1sts]], [[1vwa]], [[1vwb]], [[1vwc]], [[1vwd]], [[1vwe]], [[1vwf]], [[1vwg]], [[1vwh]], [[1vwi]], [[1vwj]], [[1vwk]], [[1vwl]], [[1vwm]], [[1vwn]], [[1vwo]], [[1vwp]], [[1vwq]], [[1vwr]], [[2g5l]] - StrAv + peptide<br /> | **[[1pts]], [[1sld]], [[1sle]], [[1slg]], [[1str]], [[1sts]], [[1vwa]], [[1vwb]], [[1vwc]], [[1vwd]], [[1vwe]], [[1vwf]], [[1vwg]], [[1vwh]], [[1vwi]], [[1vwj]], [[1vwk]], [[1vwl]], [[1vwm]], [[1vwn]], [[1vwo]], [[1vwp]], [[1vwq]], [[1vwr]], [[2g5l]] - StrAv + peptide<br /> | ||
[[1slf]] - StrAv + SO4<br /> | **[[1slf]] - StrAv + SO4<br /> | ||
[[1sre]], [[1srf]], [[1srg]], [[1srh]], [[1sri]], [[1srj]] - StrAv + benzoic acid ligands<br /> | **[[1sre]], [[1srf]], [[1srg]], [[1srh]], [[1sri]], [[1srj]] - StrAv + benzoic acid ligands<br /> | ||
[[1lcv]], [[1lcw]], [[1lcz]], [[1i9h]] – StrAv+biotin derivative<br /> | **[[1lcv]], [[1lcw]], [[1lcz]], [[1i9h]] – StrAv+biotin derivative<br /> | ||
[[2izk]], [[2rth]], [[2rti]], [[2rtj]], [[2rtk]] – StrAV+glycouril<br /> | **[[2izk]], [[2rth]], [[2rti]], [[2rtj]], [[2rtk]] – StrAV+glycouril<br /> | ||
[[2qcb]], [[2wpu]] – StrAv+Ru ligand | **[[2qcb]], [[2wpu]] – StrAv+Ru ligand | ||
* Rhizavidin | |||
[[3ew1]] – RhiAv – ''Rhizobium etli''<br /> | **[[3ew1]] – RhiAv – ''Rhizobium etli''<br /> | ||
[[3ew2]] – RhiAV+biotin<br /> | **[[3ew2]] – RhiAV+biotin<br /> | ||
* Xenavidin | |||
[[2uz2]], [[2uyw]] – XenAv – frog<br /> | **[[2uz2]], [[2uyw]] – XenAv – frog<br /> | ||
* Tamavidin | |||
[[2zsc]] – TanAv – Tamogitake mushroom | **[[2zsc]] – TanAv – Tamogitake mushroom | ||
*Bradavidin | |||
[[4ggr]], [[4ggt]] – BjAv – ''Bradyrhizobium japonicum''<br /> | **[[4ggr]], [[4ggt]] – BjAv – ''Bradyrhizobium japonicum''<br /> | ||
[[4ggz]] – BjAv + biotin<br /> | **[[4ggz]] – BjAv + biotin<br /> | ||
*Avidin-related protein AVR2 | |||
[[1wbi]] – cAVR2<br /> | **[[1wbi]] – cAVR2<br /> | ||
*Avidin-related protein AVR4 | |||
**[[2fhl]] – cAVR4+biotinyl p-nitroaniline<br /> | |||
**[[2of9]], [[2ofa]], [[1y53]], [[3mm0]] - cAVR4 (mutant)<br /> | |||
**[[2fhn]], [[2of8]], [[2ofb]] - cAVR4 (mutant)+biotinyl p-nitroaniline<br /> | |||
**[[1y52]], [[1y55]] - cAVR4 (mutant)+biotin<br /> | |||
**[[2mf6]] - cAVR4/Av (mutant)+biotin – NMR<br /> | |||
}} | |||
==Reference== | ==Reference== | ||