Helices in Proteins: Difference between revisions
Jump to navigation
Jump to search
tring to get synchronization working again |
m just layout |
||
| Line 4: | Line 4: | ||
Each of the three examples below is a decapeptide fragment extracted from an actual protein structure in the [[PDB]]. They are shown using the same scale, for a better comparison (as a consequence, zoom in the Jmol applets is disabled). | Each of the three examples below is a decapeptide fragment extracted from an actual protein structure in the [[PDB]]. They are shown using the same scale, for a better comparison (as a consequence, zoom in the Jmol applets is disabled). | ||
<span style="font-size: | <span style="font-size:120%; color:red;"> | ||
<jmol> | <jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| Line 24: | Line 24: | ||
</th> | </th> | ||
</tr> | </tr> | ||
<tr | <tr> | ||
<td style="vertical-align:top;text-align:center;"> | |||
<Structure name='jmol_3' load='3L79_514-525.pdb' size='260' scene='Helices_in_Proteins/3_10_helix_start/1' /> | <Structure name='jmol_3' load='3L79_514-525.pdb' size='260' scene='Helices_in_Proteins/3_10_helix_start/1' /> | ||
</td> | </td> | ||
<td> | <td style="vertical-align:top;text-align:center;"> | ||
<Structure name='jmol_a' load='1HHO_B_5-16.pdb' size='260' scene='Helices_in_Proteins/Alpha_helix_start/1' /> | <Structure name='jmol_a' load='1HHO_B_5-16.pdb' size='260' scene='Helices_in_Proteins/Alpha_helix_start/1' /> | ||
</td> | </td> | ||
<td> | <td style="vertical-align:top;text-align:center;"> | ||
<Structure name='jmol_p' load='2QD3_A_346-357.pdb' size='260' scene='Helices_in_Proteins/Pi_helix_start/3' /> | <Structure name='jmol_p' load='2QD3_A_346-357.pdb' size='260' scene='Helices_in_Proteins/Pi_helix_start/3' /> | ||
</td> | </td> | ||
</tr> | </tr> | ||
<tr | <tr> | ||
<td style="vertical-align:top;text-align:center;"> | |||
3<sub>10</sub> | 3<sub>10</sub> | ||
<br />3 residues/turn | <br />3 residues/turn | ||
| Line 45: | Line 44: | ||
<br />φ = -49°, ψ = -26° | <br />φ = -49°, ψ = -26° | ||
<br />[[3l79]]: 514-525 | <br />[[3l79]]: 514-525 | ||
<br /><scene name='Helices_in_Proteins/3_10_helix_start/1' target='jmol_3'>scene 1</scene> | |||
</td> | </td> | ||
<td> | <td style="vertical-align:top;text-align:center;"> | ||
3.6<sub>13</sub> | 3.6<sub>13</sub> | ||
<br />3.6 residues/turn | <br />3.6 residues/turn | ||
| Line 55: | Line 55: | ||
<br />1hho chain B: 5-16 | <br />1hho chain B: 5-16 | ||
</td> | </td> | ||
<td> | <td style="vertical-align:top;text-align:center;"> | ||
4.4<sub>16</sub> | 4.4<sub>16</sub> | ||
<br />4.4 residues/turn | <br />4.4 residues/turn | ||