Sandbox Reserved 4

This Sandbox is Reserved from May 10, 2015, through July 31, 2015 for use by the class Protein 3D Structure Visualization & Structural Bioinformatics taught by Eric Martz and Keiichi Namba at Osaka University, Japan. This reservation includes Sandbox Reserved 1 through Sandbox Reserved 10. Syllabus.

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spinqualitylabelsall models Insert caption here Show:Asymmetric Unit Biological Assembly Drag the structure with the mouse to rotate   Export Animated Image

This is complex of TrkA and NGF.

1)Ligands and parallel beta sheet

is parallel beta sheet and ligands in chain B.

The ligands are sugar and are attached to parallel beta sheet.

Probably, they interfaced with ASN95 and ASN121.

2)each chains temperature

is expressed.

This figure says that the temperature of chain E and F is lower than that of chain A and B. Especially, chain B is very high temperature, however, Chain A and B is the same sequence. It is thought that the sample is not crystallized well.