User:Yunlong Zhao/Sandbox 1: Difference between revisions

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==Introduction==
==Introduction==
<StructureSection load='1stp' size='340' side='right' caption='Caption for this structure' scene=''>
<StructureSection load='1stp' size='340' side='right' caption='Caption for this structure' scene=''>
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Antithrombin and thrombin interactions play an important role in multiple functions. Interestingly, an heparin or polysaccharides can regulate the function of antithrombin to different signaling. <ref>DOI 10.1021/bi034524y</ref>
You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.<ref>DOI 10.1021/bi034524y</ref>


== Function ==
== Heparin Binding site on antithrombin ==


== Disease ==
Green scene 1 will be a antithrombin specific site for binding heparin
Green scene 2 will be the complex with heparin


== Relevance ==
== The mechanism of heparin regulating antithrombin thrombin interaction ==
 
Green scene 1 will be the interface between AT and thrombin
Green scene 2 will be the the interface structure plus heparin


== Structural highlights ==


This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.
This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.