2vng: Difference between revisions

No edit summary
No edit summary
Line 1: Line 1:
[[Image:2vng.jpg|left|200px]]<br /><applet load="2vng" size="350" color="white" frame="true" align="right" spinBox="true"
[[Image:2vng.jpg|left|200px]]
caption="2vng, resolution 1.40&Aring;" />
 
'''FAMILY 51 CARBOHYDRATE BINDING MODULE FROM A FAMILY 98 GLYCOSIDE HYDROLASE PRODUCED BY CLOSTRIDIUM PERFRINGENS IN COMPLEX WITH BLOOD GROUP A-TRISACCHARIDE LIGAND.'''<br />
{{Structure
|PDB= 2vng |SIZE=350|CAPTION= <scene name='initialview01'>2vng</scene>, resolution 1.40&Aring;
|SITE= <scene name='pdbsite=AC1:Binding+Site+For+Residue+A2g+B+1211'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Gal+B+1212'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Fuc+B+1213'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+A2g+A+1210'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Gal+A+1211'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+Fuc+A+1212'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+Ca+A+1213'>AC7</scene> and <scene name='pdbsite=AC8:Binding+Site+For+Residue+Ca+B+1214'>AC8</scene>
|LIGAND= <scene name='pdbligand=CA:CALCIUM ION'>CA</scene>
|ACTIVITY=
|GENE=
}}
 
'''FAMILY 51 CARBOHYDRATE BINDING MODULE FROM A FAMILY 98 GLYCOSIDE HYDROLASE PRODUCED BY CLOSTRIDIUM PERFRINGENS IN COMPLEX WITH BLOOD GROUP A-TRISACCHARIDE LIGAND.'''
 


==Overview==
==Overview==
Line 7: Line 16:


==About this Structure==
==About this Structure==
2VNG is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_perfringens Clostridium perfringens] with <scene name='pdbligand=CA:'>CA</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Known structural/functional Sites: <scene name='pdbsite=AC1:Binding+Site+For+Residue+A2g+B+1211'>AC1</scene>, <scene name='pdbsite=AC2:Binding+Site+For+Residue+Gal+B+1212'>AC2</scene>, <scene name='pdbsite=AC3:Binding+Site+For+Residue+Fuc+B+1213'>AC3</scene>, <scene name='pdbsite=AC4:Binding+Site+For+Residue+A2g+A+1210'>AC4</scene>, <scene name='pdbsite=AC5:Binding+Site+For+Residue+Gal+A+1211'>AC5</scene>, <scene name='pdbsite=AC6:Binding+Site+For+Residue+Fuc+A+1212'>AC6</scene>, <scene name='pdbsite=AC7:Binding+Site+For+Residue+Ca+A+1213'>AC7</scene> and <scene name='pdbsite=AC8:Binding+Site+For+Residue+Ca+B+1214'>AC8</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VNG OCA].  
2VNG is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Clostridium_perfringens Clostridium perfringens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VNG OCA].  


==Reference==
==Reference==
Divergent modes of glycan recognition by a new family of carbohydrate-binding modules., Gregg KJ, Finn R, Abbott DW, Boraston AB, J Biol Chem. 2008 Feb 21;. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=18292090 18292090]
Divergent modes of glycan recognition by a new family of carbohydrate-binding modules., Gregg KJ, Finn R, Abbott DW, Boraston AB, J Biol Chem. 2008 Feb 21;. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18292090 18292090]
[[Category: Clostridium perfringens]]
[[Category: Clostridium perfringens]]
[[Category: Single protein]]
[[Category: Single protein]]
Line 25: Line 34:
[[Category: hydrolase]]
[[Category: hydrolase]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 5 13:25:57 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:47:47 2008''

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA