Proteopedia:Wishlist: Difference between revisions
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Eran Hodis (talk | contribs) No edit summary |
Eric Martz (talk | contribs) added singular/plural search issue |
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# In every article titled with a single PDB id code, a link to (for a random case) "Explore 2ace" that goes to FirstGlance in Jmol. The link syntax is [http://bioportal.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ace http://bioportal.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ace]. | # In every article titled with a single PDB id code, a link to (for a random case) "Explore 2ace" that goes to FirstGlance in Jmol. The link syntax is [http://bioportal.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ace http://bioportal.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ace]. | ||
# Searching for a plural should find the singular match, and vice versa. For example: I searched for "histocompatibility antigens" and did not find the page "Category: Histocompatibility antigen". Searching for "histocompatibility antigen" did find this page. [[User:Emartz|Emartz]] 19:00, 8 March 2008 (IST) | |||
# '''Added (March 2, 2008):''' Quality (antialiasing) chosen by the user with "toggle quality" should remain in effect for all green links within that page. Imagine that you're projecting scenes to a class. Currently, with every new scene, you have to click "toggle quality" again to get high quality. | # '''Added (March 2, 2008):''' Quality (antialiasing) chosen by the user with "toggle quality" should remain in effect for all green links within that page. Imagine that you're projecting scenes to a class. Currently, with every new scene, you have to click "toggle quality" again to get high quality. | ||
# When saving a scene (in the "save scene" dialog), a radio button to choose between "force spinning on", "force spinning off", "inherit spinning set by the user with 'toggle spinning'". | # When saving a scene (in the "save scene" dialog), a radio button to choose between "force spinning on", "force spinning off", "inherit spinning set by the user with 'toggle spinning'". | ||
Revision as of 20:00, 8 March 2008
This is the page to list features you wish Proteopedia had. As Proteopedia grows and develops, we will try to include the best and most appropriate ideas.
If you want to report a problem in an existing feature, please do so at Proteopedia:Problems.
Suggestions from Eric Martz
- In every article titled with a single PDB id code, a link to (for a random case) "Explore 2ace" that goes to FirstGlance in Jmol. The link syntax is http://bioportal.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ace.
- Searching for a plural should find the singular match, and vice versa. For example: I searched for "histocompatibility antigens" and did not find the page "Category: Histocompatibility antigen". Searching for "histocompatibility antigen" did find this page. Emartz 19:00, 8 March 2008 (IST)
- Added (March 2, 2008): Quality (antialiasing) chosen by the user with "toggle quality" should remain in effect for all green links within that page. Imagine that you're projecting scenes to a class. Currently, with every new scene, you have to click "toggle quality" again to get high quality.
- When saving a scene (in the "save scene" dialog), a radio button to choose between "force spinning on", "force spinning off", "inherit spinning set by the user with 'toggle spinning'".
- Support two Jmols side by side, for comparisons.
- Synchronize mouse-directed rotations and zooms (this now works amazingly well, see Chapter 4 in the Demo Tutorial at http://bioinformatics.org/jmol-tutorials -- where by the way you can also see "toggle quality" working very clearly -- my links are labeled "smoother rotation" and "smoother graphics" to the lower left of Jmol).
- Provide a mechanism for one green link that sends separate scripts to each Jmol simultaneously. Maybe not necessary? Just use two green links? What is cool is to start with scenes that align the two molecules. Then they stay aligned as you rotate/zoom with the mouse (provided spin is left off at the beginning -- when it is on, one molecule tends to lag behind the other).