2hft: Difference between revisions
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'''THE CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF HUMAN TISSUE FACTOR AT 1.7 ANGSTROMS RESOLUTION''' | {{Structure | ||
|PDB= 2hft |SIZE=350|CAPTION= <scene name='initialview01'>2hft</scene>, resolution 1.69Å | |||
|SITE= | |||
|LIGAND= <scene name='pdbligand=SO4:SULFATE ION'>SO4</scene> | |||
|ACTIVITY= | |||
|GENE= | |||
}} | |||
'''THE CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF HUMAN TISSUE FACTOR AT 1.7 ANGSTROMS RESOLUTION''' | |||
==Overview== | ==Overview== | ||
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==About this Structure== | ==About this Structure== | ||
2HFT is a [ | 2HFT is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. This structure supersedes the now removed PDB entry 1HFT. The following page contains interesting information on the relation of 2HFT with [[http://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/pdb75_1.html Tissue Factor]]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HFT OCA]. | ||
==Reference== | ==Reference== | ||
The crystal structure of the extracellular domain of human tissue factor refined to 1.7 A resolution., Muller YA, Ultsch MH, de Vos AM, J Mol Biol. 1996 Feb 16;256(1):144-59. PMID:[http:// | The crystal structure of the extracellular domain of human tissue factor refined to 1.7 A resolution., Muller YA, Ultsch MH, de Vos AM, J Mol Biol. 1996 Feb 16;256(1):144-59. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8609606 8609606] | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
[[Category: Single protein]] | [[Category: Single protein]] | ||
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[[Category: coagulation factor]] | [[Category: coagulation factor]] | ||
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:16:32 2008'' | ||
Revision as of 18:16, 20 March 2008
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THE CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF HUMAN TISSUE FACTOR AT 1.7 ANGSTROMS RESOLUTION
OverviewOverview
Exposure of blood to cells expressing tissue factor results in formation of a high-affinity complex with factor VIIa, initiating the extrinsic pathway of blood coagulation by the activation of factors IX and X. The structure of the extracellular portion of tissue factor was refined to a crystallographic R-value of 20.4% to a resolution of 1.69 A against synchroton data collected from a flash-frozen crystal. The structure consists of two fibronectin type III modules whose hydrophobic cores merge in the domain-domain interface, suggesting that the extracellular portion serves as a relatively rigid template for factor VIIa binding. Analysis of the hydrophobic core of each individual module identifies a cluster of residues forming a packing motif centered on Trp25 which appears to be characteristic for fibronectin type III modules. Comparison of the structure to that of the human growth hormone receptor, which belongs to a different class (class I) of the same cytokine receptor superfamily, shows that the structure of the individual domains is very similar but that the relative domain-domain orientation differs greatly. Even though the WSXWS box characteristic of the class I cytokine receptors is not present in tissue factor, the analogous residues have the identical polyproline helical conformation. Mapping of residues important for biological activity on the structure shows that all these are located on Beta-strands in a small number of distinct clusters, on the opposite side of the molecule compared to the ligand binding determinants of the growth hormone receptor.
DiseaseDisease
Known disease associated with this structure: Esophageal squamous cell carcinoma OMIM:[606551]
About this StructureAbout this Structure
2HFT is a Single protein structure of sequence from Homo sapiens. This structure supersedes the now removed PDB entry 1HFT. The following page contains interesting information on the relation of 2HFT with [Tissue Factor]. Full crystallographic information is available from OCA.
ReferenceReference
The crystal structure of the extracellular domain of human tissue factor refined to 1.7 A resolution., Muller YA, Ultsch MH, de Vos AM, J Mol Biol. 1996 Feb 16;256(1):144-59. PMID:8609606
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