2gfb: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
Line 1: Line 1:
[[Image:2gfb.gif|left|200px]]<br /><applet load="2gfb" size="350" color="white" frame="true" align="right" spinBox="true"
[[Image:2gfb.gif|left|200px]]
caption="2gfb, resolution 3.0&Aring;" />
 
'''CRYSTAL STRUCTURE OF A CATALYTIC FAB HAVING ESTERASE-LIKE ACTIVITY'''<br />
{{Structure
|PDB= 2gfb |SIZE=350|CAPTION= <scene name='initialview01'>2gfb</scene>, resolution 3.0&Aring;
|SITE=
|LIGAND=
|ACTIVITY=
|GENE=
}}
 
'''CRYSTAL STRUCTURE OF A CATALYTIC FAB HAVING ESTERASE-LIKE ACTIVITY'''
 


==Overview==
==Overview==
Line 7: Line 16:


==About this Structure==
==About this Structure==
2GFB is a [http://en.wikipedia.org/wiki/Protein_complex Protein complex] structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GFB OCA].  
2GFB is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GFB OCA].  


==Reference==
==Reference==
Crystal structure of a catalytic antibody Fab with esterase-like activity., Golinelli-Pimpaneau B, Gigant B, Bizebard T, Navaza J, Saludjian P, Zemel R, Tawfik DS, Eshhar Z, Green BS, Knossow M, Structure. 1994 Mar 15;2(3):175-83. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=8069632 8069632]
Crystal structure of a catalytic antibody Fab with esterase-like activity., Golinelli-Pimpaneau B, Gigant B, Bizebard T, Navaza J, Saludjian P, Zemel R, Tawfik DS, Eshhar Z, Green BS, Knossow M, Structure. 1994 Mar 15;2(3):175-83. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8069632 8069632]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
[[Category: Protein complex]]
[[Category: Protein complex]]
Line 17: Line 26:
[[Category: immunoglobulin]]
[[Category: immunoglobulin]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:31:06 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:03:59 2008''

Revision as of 18:04, 20 March 2008

File:2gfb.gif


PDB ID 2gfb

Drag the structure with the mouse to rotate
, resolution 3.0Å
Coordinates: save as pdb, mmCIF, xml



CRYSTAL STRUCTURE OF A CATALYTIC FAB HAVING ESTERASE-LIKE ACTIVITY


OverviewOverview

BACKGROUND: Antibodies with catalytic properties can be prepared by eliciting an antibody response against 'transition state analog' haptens. The specificity, rate and number of reaction cycles observed with these antibodies more closely resemble the properties of enzymes than any of the many other known enzyme-mimicking systems. RESULTS: We have determined to 3 A resolution the first X-ray structure of a catalytic antibody Fab. This antibody catalyzes the hydrolysis of a p-nitrophenyl ester. In conjunction with binding studies in solution, this structure of the uncomplexed site suggests a model for transition state fixation where two tyrosines mimic the oxyanion binding hole of serine proteases. A comparison with the structures of known Fabs specific for low molecular weight haptens reveals that this catalytic antibody has an unusually long groove at its combining site. CONCLUSION: Since transition state analogs contain elements of the desired product, product inhibition is a severe problem in antibody catalysis. The observation of a long groove at the combining site may relate to the ability of this catalytic antibody to achieve multiple cycles of reaction.

About this StructureAbout this Structure

2GFB is a Protein complex structure of sequences from Mus musculus. Full crystallographic information is available from OCA.

ReferenceReference

Crystal structure of a catalytic antibody Fab with esterase-like activity., Golinelli-Pimpaneau B, Gigant B, Bizebard T, Navaza J, Saludjian P, Zemel R, Tawfik DS, Eshhar Z, Green BS, Knossow M, Structure. 1994 Mar 15;2(3):175-83. PMID:8069632

Page seeded by OCA on Thu Mar 20 17:03:59 2008

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA