3gmf: Difference between revisions
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==Crystal structure of protein-disulfide isomerase from Novosphingobium aromaticivorans== | |||
<StructureSection load='3gmf' size='340' side='right' caption='[[3gmf]], [[Resolution|resolution]] 1.76Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[3gmf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Novosphingobium_aromaticivorans Novosphingobium aromaticivorans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GMF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3GMF FirstGlance]. <br> | |||
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr> | |||
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Saro_0958 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=48935 Novosphingobium aromaticivorans])</td></tr> | |||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3gmf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gmf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3gmf RCSB], [http://www.ebi.ac.uk/pdbsum/3gmf PDBsum], [http://www.topsan.org/Proteins/NYSGXRC/3gmf TOPSAN]</span></td></tr> | |||
== | </table> | ||
[[3gmf]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Novosphingobium_aromaticivorans Novosphingobium aromaticivorans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GMF OCA]. | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gm/3gmf_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | |||
<div style="clear:both"></div> | |||
__TOC__ | |||
</StructureSection> | |||
[[Category: Novosphingobium aromaticivorans]] | [[Category: Novosphingobium aromaticivorans]] | ||
[[Category: Almo, S C | [[Category: Almo, S C]] | ||
[[Category: Burley, S K | [[Category: Burley, S K]] | ||
[[Category: Chang, S | [[Category: Chang, S]] | ||
[[Category: Freeman, J | [[Category: Freeman, J]] | ||
[[Category: Morano, C | [[Category: Morano, C]] | ||
[[Category: | [[Category: Structural genomic]] | ||
[[Category: Patskovsky, Y | [[Category: Patskovsky, Y]] | ||
[[Category: Ramagopal, U A | [[Category: Ramagopal, U A]] | ||
[[Category: Sauder, J M | [[Category: Sauder, J M]] | ||
[[Category: Toro, R | [[Category: Toro, R]] | ||
[[Category: Disulfide isomerase]] | [[Category: Disulfide isomerase]] | ||
[[Category: Isomerase]] | [[Category: Isomerase]] | ||
[[Category: New | [[Category: NYSGXRC, New York SGX Research Center for Structural Genomics]] | ||
[[Category: Oxidoreductase]] | [[Category: Oxidoreductase]] | ||
[[Category: Protein structure initiative | [[Category: PSI, Protein structure initiative]] | ||