3dci: Difference between revisions

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[[Image:3dci.png|left|200px]]
==The Structure of a putative arylesterase from Agrobacterium tumefaciens str. C58==
 
<StructureSection load='3dci' size='340' side='right' caption='[[3dci]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
{{STRUCTURE_3dci|  PDB=3dci  |  SCENE=  }}
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3dci]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DCI OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DCI FirstGlance]. <br>
===The Structure of a putative arylesterase from Agrobacterium tumefaciens str. C58===
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
 
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">AGR_L_2749, Atu3454 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=176299 Agrobacterium tumefaciens str. C58])</td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3dci FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dci OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3dci RCSB], [http://www.ebi.ac.uk/pdbsum/3dci PDBsum], [http://www.topsan.org/Proteins/MCSG/3dci TOPSAN]</span></td></tr>
[[3dci]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DCI OCA].  
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dc/3dci_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Agrobacterium tumefaciens str. c58]]
[[Category: Agrobacterium tumefaciens str. c58]]
[[Category: Binkowski, T A.]]
[[Category: Binkowski, T A]]
[[Category: Cuff, M E.]]
[[Category: Cuff, M E]]
[[Category: Edwards, A.]]
[[Category: Edwards, A]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak, A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Structural genomic]]
[[Category: Savchenko, A.]]
[[Category: Savchenko, A]]
[[Category: Xu, X.]]
[[Category: Xu, X]]
[[Category: Zheng, H.]]
[[Category: Zheng, H]]
[[Category: Agrobacterium tumefacien]]
[[Category: Agrobacterium tumefacien]]
[[Category: Arylesterase]]
[[Category: Arylesterase]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Mcsg]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: PSI, Protein structure initiative]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Sgnh_hydrolase subfamily]]
[[Category: Sgnh_hydrolase subfamily]]
[[Category: Structural genomic]]

Revision as of 11:02, 12 November 2014

The Structure of a putative arylesterase from Agrobacterium tumefaciens str. C58The Structure of a putative arylesterase from Agrobacterium tumefaciens str. C58

Structural highlights

3dci is a 3 chain structure with sequence from Agrobacterium tumefaciens str. c58. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, ,
NonStd Res:
Gene:AGR_L_2749, Atu3454 (Agrobacterium tumefaciens str. C58)
Resources:FirstGlance, OCA, RCSB, PDBsum, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3dci, resolution 2.00Å

Drag the structure with the mouse to rotate

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OCA