3db5: Difference between revisions

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[[Image:3db5.png|left|200px]]
==Crystal structure of methyltransferase domain of human PR domain-containing protein 4==
 
<StructureSection load='3db5' size='340' side='right' caption='[[3db5]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
{{STRUCTURE_3db5|  PDB=3db5  |  SCENE=  }}
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3db5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DB5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3DB5 FirstGlance]. <br>
===Crystal structure of methyltransferase domain of human PR domain-containing protein 4===
</td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">PRDM4, PFM1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
 
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3db5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3db5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3db5 RCSB], [http://www.ebi.ac.uk/pdbsum/3db5 PDBsum]</span></td></tr>
==About this Structure==
</table>
[[3db5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DB5 OCA].  
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/db/3db5_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Amaya, M F.]]
[[Category: Amaya, M F]]
[[Category: Arrowsmith, C H.]]
[[Category: Arrowsmith, C H]]
[[Category: Bochkarev, A.]]
[[Category: Bochkarev, A]]
[[Category: Bountra, C.]]
[[Category: Bountra, C]]
[[Category: Edwards, A M.]]
[[Category: Edwards, A M]]
[[Category: Loppnau, P.]]
[[Category: Loppnau, P]]
[[Category: Min, J.]]
[[Category: Min, J]]
[[Category: Plotnikov, A N.]]
[[Category: Plotnikov, A N]]
[[Category: SGC, Structural Genomics Consortium.]]
[[Category: Structural genomic]]
[[Category: Weigelt, J.]]
[[Category: Weigelt, J]]
[[Category: Wu, H.]]
[[Category: Wu, H]]
[[Category: Zeng, H.]]
[[Category: Zeng, H]]
[[Category: Dna-binding]]
[[Category: Dna-binding]]
[[Category: Metal-binding]]
[[Category: Metal-binding]]
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[[Category: Prdm4]]
[[Category: Prdm4]]
[[Category: Sgc]]
[[Category: Sgc]]
[[Category: Structural genomic]]
[[Category: Structural genomics consortium]]
[[Category: Transcription]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Transcription regulation]]
[[Category: Transferase]]
[[Category: Transferase]]
[[Category: Zinc-finger]]
[[Category: Zinc-finger]]

Revision as of 11:21, 12 November 2014

Crystal structure of methyltransferase domain of human PR domain-containing protein 4Crystal structure of methyltransferase domain of human PR domain-containing protein 4

Structural highlights

3db5 is a 2 chain structure with sequence from Homo sapiens. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
NonStd Res:
Gene:PRDM4, PFM1 (Homo sapiens)
Resources:FirstGlance, OCA, RCSB, PDBsum

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3db5, resolution 2.15Å

Drag the structure with the mouse to rotate

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OCA