Sandbox Reserved 718: Difference between revisions

No edit summary
No edit summary
Line 15: Line 15:
The other domain, residues 137-176<ref>Loughlin, F. E., Gebert, L. F. R., Towbin, H., Brunschweiger, A., Hall, J. and Allain, F. H.-T.: ''Structural basis of pre-let-7 miRNA recognition by the zinc knuckles of pluripotency factor Lin28'' In: Nature Structural & Molecular Biology 19, S. 84-89, Dezember 11, 2012</ref>, has the binding element AAGNNG (most frequent sequence: AAGGAG) which can be found downstream of the GNGAY motif. The first G builds a <scene name='Sandbox_Reserved_718/Hydrogenbond/1'>hydorgen bond</scene> with <scene name='Sandbox_Reserved_718/Lys160/2'>LYS160</scene> in the zinc finger motif. <ref>Jun Cho, Hyeshik Chang, S. Chul Kwon, Baekgyu Kim, Yoosik Kim, Junho Choe, Minju Ha, Yoon Ki Kim, and V. Narry Kim: ''Lin28A Is a Suppressor of ER-Associated Translation in Embryonic Stem Cells.'' In: Cell 151, S.765–777, November 9, 2012</ref>
The other domain, residues 137-176<ref>Loughlin, F. E., Gebert, L. F. R., Towbin, H., Brunschweiger, A., Hall, J. and Allain, F. H.-T.: ''Structural basis of pre-let-7 miRNA recognition by the zinc knuckles of pluripotency factor Lin28'' In: Nature Structural & Molecular Biology 19, S. 84-89, Dezember 11, 2012</ref>, has the binding element AAGNNG (most frequent sequence: AAGGAG) which can be found downstream of the GNGAY motif. The first G builds a <scene name='Sandbox_Reserved_718/Hydrogenbond/1'>hydorgen bond</scene> with <scene name='Sandbox_Reserved_718/Lys160/2'>LYS160</scene> in the zinc finger motif. <ref>Jun Cho, Hyeshik Chang, S. Chul Kwon, Baekgyu Kim, Yoosik Kim, Junho Choe, Minju Ha, Yoon Ki Kim, and V. Narry Kim: ''Lin28A Is a Suppressor of ER-Associated Translation in Embryonic Stem Cells.'' In: Cell 151, S.765–777, November 9, 2012</ref>
When Lin28A interacts with <scene name='Sandbox_Reserved_718/Let-7/1'>let-7</scene>(main target), they build a complex with a crystallographic structure together.
When Lin28A interacts with <scene name='Sandbox_Reserved_718/Let-7/1'>let-7</scene>(main target), they build a complex with a crystallographic structure together.
<Structure load='2li8' size='300' frame='true' align='right' caption='pdb 2li8 complex lin28A/let-7' scene='Sandbox_Reserved_718/Lin28a_let-7/1' />
<Structure load='2li8' size='300' frame='true' align='left' caption='' scene='Sandbox_Reserved_718/Lin28a_let-7/1' />


== '''Activity''' ==
== '''Activity''' ==

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA, Teresa Wiese, Katrin Frohnmüller