1uad: Difference between revisions
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'''Crystal structure of the RalA-GppNHp-Sec5 Ral-binding domain complex''' | {{Structure | ||
|PDB= 1uad |SIZE=350|CAPTION= <scene name='initialview01'>1uad</scene>, resolution 2.10Å | |||
|SITE= | |||
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene> and <scene name='pdbligand=GNP:PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER'>GNP</scene> | |||
|ACTIVITY= | |||
|GENE= | |||
}} | |||
'''Crystal structure of the RalA-GppNHp-Sec5 Ral-binding domain complex''' | |||
==Overview== | ==Overview== | ||
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==About this Structure== | ==About this Structure== | ||
1UAD is a [ | 1UAD is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UAD OCA]. | ||
==Reference== | ==Reference== | ||
Structural basis of the interaction between RalA and Sec5, a subunit of the sec6/8 complex., Fukai S, Matern HT, Jagath JR, Scheller RH, Brunger AT, EMBO J. 2003 Jul 1;22(13):3267-78. PMID:[http:// | Structural basis of the interaction between RalA and Sec5, a subunit of the sec6/8 complex., Fukai S, Matern HT, Jagath JR, Scheller RH, Brunger AT, EMBO J. 2003 Jul 1;22(13):3267-78. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12839989 12839989] | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
[[Category: Protein complex]] | [[Category: Protein complex]] | ||
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[[Category: small gtp-binding protein]] | [[Category: small gtp-binding protein]] | ||
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 14:29:22 2008'' | ||
Revision as of 15:29, 20 March 2008
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| Coordinates: | save as pdb, mmCIF, xml | ||||||
Crystal structure of the RalA-GppNHp-Sec5 Ral-binding domain complex
OverviewOverview
The sec6/8 complex or exocyst is an octameric protein complex that functions during cell polarization by regulating the site of exocytic vesicle docking to the plasma membrane, in concert with small GTP-binding proteins. The Sec5 subunit of the mammalian sec6/8 complex binds Ral in a GTP-dependent manner. Here we report the crystal structure of the complex between the Ral-binding domain of Sec5 and RalA bound to a non-hydrolyzable GTP analog (GppNHp) at 2.1 A resolution, providing the first structural insights into the mechanism and specificity of sec6/8 regulation. The Sec5 Ral-binding domain folds into an immunoglobulin-like beta-sandwich structure, which represents a novel fold for an effector of a GTP-binding protein. The interface between the two proteins involves a continuous antiparallel beta-sheet, similar to that found in other effector/G-protein complexes, such as Ras and Rap1A. Specific interactions unique to the RalA.Sec5 complex include Sec5 Thr11 and Arg27, and RalA Glu38, which we show are required for complex formation by isothermal titration calorimetry. Comparison of the structures of GppNHp- and GDP-bound RalA suggests a nucleotide-dependent switch mechanism for Sec5 binding.
About this StructureAbout this Structure
1UAD is a Protein complex structure of sequences from Homo sapiens and Rattus norvegicus. Full crystallographic information is available from OCA.
ReferenceReference
Structural basis of the interaction between RalA and Sec5, a subunit of the sec6/8 complex., Fukai S, Matern HT, Jagath JR, Scheller RH, Brunger AT, EMBO J. 2003 Jul 1;22(13):3267-78. PMID:12839989
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