1psh: Difference between revisions
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[[Image:1psh.gif|left|200px]] | [[Image:1psh.gif|left|200px]] | ||
'''CRYSTAL STRUCTURE OF PHOSPHOLIPASE A2 FROM INDIAN COBRA REVEALS A TRIMERIC ASSOCIATION''' | {{Structure | ||
|PDB= 1psh |SIZE=350|CAPTION= <scene name='initialview01'>1psh</scene>, resolution 2.3Å | |||
|SITE= | |||
|LIGAND= <scene name='pdbligand=CA:CALCIUM ION'>CA</scene> | |||
|ACTIVITY= [http://en.wikipedia.org/wiki/Phospholipase_A(2) Phospholipase A(2)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.1.4 3.1.1.4] | |||
|GENE= | |||
}} | |||
'''CRYSTAL STRUCTURE OF PHOSPHOLIPASE A2 FROM INDIAN COBRA REVEALS A TRIMERIC ASSOCIATION''' | |||
==Overview== | ==Overview== | ||
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==About this Structure== | ==About this Structure== | ||
1PSH is a [ | 1PSH is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Naja_naja Naja naja]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PSH OCA]. | ||
==Reference== | ==Reference== | ||
Crystal structure of phospholipase A2 from Indian cobra reveals a trimeric association., Fremont DH, Anderson DH, Wilson IA, Dennis EA, Xuong NH, Proc Natl Acad Sci U S A. 1993 Jan 1;90(1):342-6. PMID:[http:// | Crystal structure of phospholipase A2 from Indian cobra reveals a trimeric association., Fremont DH, Anderson DH, Wilson IA, Dennis EA, Xuong NH, Proc Natl Acad Sci U S A. 1993 Jan 1;90(1):342-6. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8419939 8419939] | ||
[[Category: Naja naja]] | [[Category: Naja naja]] | ||
[[Category: Phospholipase A(2)]] | [[Category: Phospholipase A(2)]] | ||
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[[Category: carboxylic ester hydrolase]] | [[Category: carboxylic ester hydrolase]] | ||
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 13:28:27 2008'' | ||
Revision as of 14:28, 20 March 2008
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| , resolution 2.3Å | |||||||
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| Ligands: | |||||||
| Activity: | Phospholipase A(2), with EC number 3.1.1.4 | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
CRYSTAL STRUCTURE OF PHOSPHOLIPASE A2 FROM INDIAN COBRA REVEALS A TRIMERIC ASSOCIATION
OverviewOverview
Phospholipase A2 (PLA2) from Indian cobra venom (Naja naja naja) was crystallized from ethanol in space group P4(3)2(1)2 in the presence of Ca2+. The x-ray crystal structure was determined to 2.3-A resolution by molecular replacement techniques using a theoretical model constructed from homologous segments of the bovine pancreatic, porcine pancreatic, and rattlesnake venom crystal structures. The structure was refined to an R value of 0.174 for 17,542 reflections between 6.0- and 2.3-A resolution (F > 2 sigma), including 148 water molecules. The 119-amino acid enzyme has an overall architecture strikingly similar to the other known PLA2 structures with regions implicated in catalysis showing the greatest structural conservation. Unexpectedly, three monomers were found to occupy the asymmetric unit and are oriented with their catalytic sites facing the pseudo-threefold axis with approximately 15% of the solvent accessible surface of each monomer buried in trimer contacts. The majority of the interactions at the subunit interfaces are made by residues unique to PLA2 sequences from cobra and krait venoms. The possible relevance of this unique trimeric structure is considered.
About this StructureAbout this Structure
1PSH is a Single protein structure of sequence from Naja naja. Full crystallographic information is available from OCA.
ReferenceReference
Crystal structure of phospholipase A2 from Indian cobra reveals a trimeric association., Fremont DH, Anderson DH, Wilson IA, Dennis EA, Xuong NH, Proc Natl Acad Sci U S A. 1993 Jan 1;90(1):342-6. PMID:8419939
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