3ln8: Difference between revisions

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[[Image:3ln8.png|left|200px]]
==The X-ray structure of Zf-RNase-1 from a new crystal form at pH 7.3==
<StructureSection load='3ln8' size='340' side='right' caption='[[3ln8]], [[Resolution|resolution]] 1.61&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[3ln8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Danio_rerio Danio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LN8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LN8 FirstGlance]. <br>
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2vq8|2vq8]], [[2vq9|2vq9]], [[3ljd|3ljd]], [[3lje|3lje]]</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ln8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ln8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ln8 RCSB], [http://www.ebi.ac.uk/pdbsum/3ln8 PDBsum]</span></td></tr>
</table>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Only recently extracellular RNases of the RNase A superfamily, with the characteristic CKxxNTF sequence signature, have been identified in fish. This has led to the recognition that these RNases are present in the whole vertebrate sub-phylum. In fact, they comprise the only enzyme family unique to vertebrates. Four RNases from zebrafish (Danio rerio) have been previously reported, with a very low RNase activity, some endowed, like human angiogenin, with powerful angiogenic and bactericidal activities. Here we report the three-dimensional structure, the thermodynamic behaviour, and the biological properties of a novel zebrafish RNase, ZF-RNase-5. The investigation of its structural and functional properties, extended to all other sub-family members, provides an inclusive description of the whole zebrafish RNase sub-family.


{{STRUCTURE_3ln8|  PDB=3ln8  |  SCENE=  }}
A new RNase sheds light on the RNase/angiogenin subfamily from zebrafish.,Pizzo E, Merlino A, Turano M, Russo Krauss I, Coscia F, Zanfardino A, Varcamonti M, Furia A, Giancola C, Mazzarella L, Sica F, D'Alessio G Biochem J. 2010 Nov 4. PMID:21050179<ref>PMID:21050179</ref>


===The X-ray structure of Zf-RNase-1 from a new crystal form at pH 7.3===
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 
</div>
{{ABSTRACT_PUBMED_21050179}}
 
==About this Structure==
[[3ln8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Danio_rerio Danio rerio]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LN8 OCA].


==See Also==
==See Also==
*[[Ribonuclease|Ribonuclease]]
*[[Ribonuclease|Ribonuclease]]
 
*[[User:Jaime.Prilusky/Test/tree|User:Jaime.Prilusky/Test/tree]]
==Reference==
== References ==
<ref group="xtra">PMID:021050179</ref><references group="xtra"/>
<references/>
__TOC__
</StructureSection>
[[Category: Danio rerio]]
[[Category: Danio rerio]]
[[Category: Krauss, I Russo.]]
[[Category: Krauss, I Russo]]
[[Category: Mazzarella, L.]]
[[Category: Mazzarella, L]]
[[Category: Merlino, A.]]
[[Category: Merlino, A]]
[[Category: Sica, F.]]
[[Category: Sica, F]]
[[Category: Angiogenin]]
[[Category: Angiogenin]]
[[Category: Fish rnase]]
[[Category: Fish rnase]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]

Revision as of 12:44, 9 December 2014

The X-ray structure of Zf-RNase-1 from a new crystal form at pH 7.3The X-ray structure of Zf-RNase-1 from a new crystal form at pH 7.3

Structural highlights

3ln8 is a 2 chain structure with sequence from Danio rerio. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
Resources:FirstGlance, OCA, RCSB, PDBsum

Publication Abstract from PubMed

Only recently extracellular RNases of the RNase A superfamily, with the characteristic CKxxNTF sequence signature, have been identified in fish. This has led to the recognition that these RNases are present in the whole vertebrate sub-phylum. In fact, they comprise the only enzyme family unique to vertebrates. Four RNases from zebrafish (Danio rerio) have been previously reported, with a very low RNase activity, some endowed, like human angiogenin, with powerful angiogenic and bactericidal activities. Here we report the three-dimensional structure, the thermodynamic behaviour, and the biological properties of a novel zebrafish RNase, ZF-RNase-5. The investigation of its structural and functional properties, extended to all other sub-family members, provides an inclusive description of the whole zebrafish RNase sub-family.

A new RNase sheds light on the RNase/angiogenin subfamily from zebrafish.,Pizzo E, Merlino A, Turano M, Russo Krauss I, Coscia F, Zanfardino A, Varcamonti M, Furia A, Giancola C, Mazzarella L, Sica F, D'Alessio G Biochem J. 2010 Nov 4. PMID:21050179[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

See Also

References

  1. Pizzo E, Merlino A, Turano M, Russo Krauss I, Coscia F, Zanfardino A, Varcamonti M, Furia A, Giancola C, Mazzarella L, Sica F, D'Alessio G. A new RNase sheds light on the RNase/angiogenin subfamily from zebrafish. Biochem J. 2010 Nov 4. PMID:21050179 doi:10.1042/BJ20100892

3ln8, resolution 1.61Å

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