Interface analysis servers: Difference between revisions
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==PDBsum== | ==PDBsum== | ||
Every PDB structure page in Proteopedia links to [http://www.ebi.ac.uk/pdbsum/ PDBsum] under the structure window where it says 'Resources'. The [http://www.ebi.ac.uk/pdbsum/ PDBsum] page for every structure includes pre-calculated data summarizing protein-protein interactions and buried surface area, protein-nucleic acid, ligand interactions and available clefts, among other data. The data are accessible via links at the top where you will see 'Prot-prot', 'Ligands', 'Clefts,' etc. depending upon what is available. Note that the protein-nucleic acid interactions, if present, will be found on the page that is accessible via the 'DNA/RNA' link | Every PDB structure page in Proteopedia links to [http://www.ebi.ac.uk/pdbsum/ PDBsum] under the structure window where it says 'Resources'. The [http://www.ebi.ac.uk/pdbsum/ PDBsum] page for every structure includes pre-calculated data summarizing protein-protein interactions and buried surface area, protein-nucleic acid, ligand interactions and available clefts, among other data. The data are accessible via links at the top where you will see 'Prot-prot', 'Ligands', 'Clefts,' etc. depending upon what is available. Note that the protein-nucleic acid interactions, if present, will be found on the page that is accessible via the 'DNA/RNA' link — there will be a link for the NUCPLOT data. <br/> | ||
It is also possible to upload your own data and get a similar report generated that contains this information.<br/> | It is also possible to upload your own data and get a similar report generated that contains this information.<br/> | ||
==References== | ==References== | ||
<references/> | <references/> | ||