Sandbox 50: Difference between revisions
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The <scene name='Sandbox_50/Ak_secondary_structure/1'>secondary_structure</scene> of the protein contains 12 alpha helices (yellow) and 7 beta sheets (green). This secondary structure is held together by <scene name='Sandbox_50/Ak_hydrogen_bonds/1'>hydrogen_bonds</scene>, which are anti-parallel between the beta sheets. | The <scene name='Sandbox_50/Ak_secondary_structure/1'>secondary_structure</scene> of the protein contains 12 alpha helices (yellow) and 7 beta sheets (green). This secondary structure is held together by <scene name='Sandbox_50/Ak_hydrogen_bonds/1'>hydrogen_bonds</scene>, which are anti-parallel between the beta sheets. | ||
==Residues== | |||
The amino acid <scene name='Sandbox_50/Ak_hydrophobic_residues/1'>hydrophobic_residues</scene> of ADK, seen in gray, is buried in the interior of the protein. While the <scene name='Sandbox_50/Ak_hydrophilic_residues1/1'>hydrophilic_residues</scene>, all the charged and polar side chains (purple), are either on the surface of the protein or exposed in the active site. | |||
<scene name='Sandbox_50/Ak_hydrophilic_residues/1'>hydrophilic_residues</scene> | |||
<scene name='Sandbox_50/Ak_alpha_helices/1'>alpha_helices</scene> | <scene name='Sandbox_50/Ak_alpha_helices/1'>alpha_helices</scene> | ||
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<scene name='Sandbox_50/Ak_water/1'>water</scene> | <scene name='Sandbox_50/Ak_water/1'>water</scene> | ||
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<scene name='Sandbox_50/Ak_water4/1'>water4</scene> | <scene name='Sandbox_50/Ak_water4/1'>water4</scene> | ||
<scene name='Sandbox_50/Ak_water5/1'>water5</scene> | <scene name='Sandbox_50/Ak_water5/1'>water5</scene> | ||
<scene name='Sandbox_50/Ak_ligand1/1'>ligand1</scene> | <scene name='Sandbox_50/Ak_ligand1/1'>ligand1</scene> | ||
<scene name='Sandbox_50/Ak_ligand3/1'>ligand3</scene> | <scene name='Sandbox_50/Ak_ligand3/1'>ligand3</scene> | ||