P53-DNA Recognition: Difference between revisions

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[[Image:p53-intro.jpg|thumb|left|300px|Figure 1: Crystal structure of a p53 DBD tetramer-DNA complex; [http://www.rcsb.org/pdb/explore/explore.do?structureId=3kz8 PDB ID# 3KZ8]<ref name='kitayner'>Kitayner M, Rozenberg H, Rohs R, Suad O, Rabinovich D, Honig B, Shakked Z. Diversity in DNA recognition by p53 revealed by crystal structures with Hoogsteen base pairs. Nat Struct Mol Biol. 2010;17(4):423-9.</ref>.]]
[[Image:p53-intro.jpg|thumb|left|300px|Figure 1: Crystal structure of a p53 DBD tetramer-DNA complex; [http://www.rcsb.org/pdb/explore/explore.do?structureId=3kz8 PDB ID# 3KZ8]<ref name='kitayner'>Kitayner M, Rozenberg H, Rohs R, Suad O, Rabinovich D, Honig B, Shakked Z. Diversity in DNA recognition by p53 revealed by crystal structures with Hoogsteen base pairs. Nat Struct Mol Biol. 2010;17(4):423-9.</ref>.]]


[[Image:p53-consensus.jpg|thumb|right|500px|Figure 2: p53 consensus site; R= A or G, Y= C or T, and W=A or T.]]
[[Image:consensus.jpg|thumb|right|500px|Figure 2: p53 consensus site; R= A or G, Y= C or T, and W=A or T.]]


[[Image:p53-domains.jpg|thumb|right|400px|Figure 3:  Frequency of p53 mutants associated with cancer derived from [http://www-p53.iarc.fr/ IARC TP53 database]. Domain architecture; N-ter=N-terminal, DBD=DNA binding domain<ref name='kitayner'/>, Tet=Tetramerization<ref name='tetra'>Jeffrey PD, Gorina S, Pavletich NP. Crystal structure of the p53 tetramerization domain. Science 1995;267:1498-502.</ref>, and C-ter=C-terminal domain. Intermediate regions are fairly disordered.]]
[[Image:p53-domains.jpg|thumb|right|400px|Figure 3:  Frequency of p53 mutants associated with cancer derived from [http://www-p53.iarc.fr/ IARC TP53 database]. Domain architecture; N-ter=N-terminal, DBD=DNA binding domain<ref name='kitayner'/>, Tet=Tetramerization<ref name='tetra'>Jeffrey PD, Gorina S, Pavletich NP. Crystal structure of the p53 tetramerization domain. Science 1995;267:1498-502.</ref>, and C-ter=C-terminal domain. Intermediate regions are fairly disordered.]]