3fwu: Difference between revisions

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[[Image:3fwu.png|left|200px]]
==Crystal structure of Leishmania major MIF1==
<StructureSection load='3fwu' size='340' side='right' caption='[[3fwu]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[3fwu]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FWU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3FWU FirstGlance]. <br>
</td></tr><tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3fwt|3fwt]]</td></tr>
<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LmjF33.1740 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5664 Leishmania major])</td></tr>
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3fwu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fwu OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3fwu RCSB], [http://www.ebi.ac.uk/pdbsum/3fwu PDBsum]</span></td></tr>
<table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fw/3fwu_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
Leishmania major, an intracellular parasitic protozoon that infects, differentiates and replicates within macrophages, expresses two closely related MIF-like proteins. To ascertain the roles and potential differences of these two Leishmania proteins, recombinant L. major MIF1 and MIF2 have been produced and the structures resolved by X-ray crystallography. Each has a trimeric ring architecture similar to mammalian MIF, but with some structurally distinct features. LmjMIF1, but not LmjMIF2, has tautomerase activity. LmjMIF2 is found in all life cycle stages whereas LmjMIF1 is found exclusively in amastigotes, the intracellular stage responsible for mammalian disease. The findings are consistent with parasite MIFs modulating or circumventing the host macrophage response, thereby promoting parasite survival, but suggest the LmjMIFs have potentially different biological roles. Analysis of the Leishmania braziliensis genome showed that this species lacks both MIF genes. Thus MIF is not a virulence factor in all species of Leishmania.


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Structures of Leishmania major orthologues of macrophage migration inhibitory factor.,Richardson JM, Morrison LS, Bland ND, Bruce S, Coombs GH, Mottram JC, Walkinshaw MD Biochem Biophys Res Commun. 2009 Mar 13;380(3):442-8. Epub 2009 Jan 31. PMID:19187777<ref>PMID:19187777</ref>
The line below this paragraph, containing "STRUCTURE_3fwu", creates the "Structure Box" on the page.
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or leave the SCENE parameter empty for the default display.
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{{STRUCTURE_3fwu|  PDB=3fwu  |  SCENE=  }}


===Crystal structure of Leishmania major MIF1===
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
 
</div>
 
== References ==
<!--
<references/>
The line below this paragraph, {{ABSTRACT_PUBMED_19187777}}, adds the Publication Abstract to the page
__TOC__
(as it appears on PubMed at http://www.pubmed.gov), where 19187777 is the PubMed ID number.
</StructureSection>
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{{ABSTRACT_PUBMED_19187777}}
 
==About this Structure==
[[3fwu]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FWU OCA].
 
==Reference==
<ref group="xtra">PMID:019187777</ref><references group="xtra"/>
[[Category: Leishmania major]]
[[Category: Leishmania major]]
[[Category: RIchardson, J M.]]
[[Category: RIchardson, J M.]]

Revision as of 12:40, 21 May 2014

Crystal structure of Leishmania major MIF1Crystal structure of Leishmania major MIF1

Structural highlights

3fwu is a 1 chain structure with sequence from Leishmania major. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Related:3fwt
Gene:LmjF33.1740 (Leishmania major)
Resources:FirstGlance, OCA, RCSB, PDBsum

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

Publication Abstract from PubMed

Leishmania major, an intracellular parasitic protozoon that infects, differentiates and replicates within macrophages, expresses two closely related MIF-like proteins. To ascertain the roles and potential differences of these two Leishmania proteins, recombinant L. major MIF1 and MIF2 have been produced and the structures resolved by X-ray crystallography. Each has a trimeric ring architecture similar to mammalian MIF, but with some structurally distinct features. LmjMIF1, but not LmjMIF2, has tautomerase activity. LmjMIF2 is found in all life cycle stages whereas LmjMIF1 is found exclusively in amastigotes, the intracellular stage responsible for mammalian disease. The findings are consistent with parasite MIFs modulating or circumventing the host macrophage response, thereby promoting parasite survival, but suggest the LmjMIFs have potentially different biological roles. Analysis of the Leishmania braziliensis genome showed that this species lacks both MIF genes. Thus MIF is not a virulence factor in all species of Leishmania.

Structures of Leishmania major orthologues of macrophage migration inhibitory factor.,Richardson JM, Morrison LS, Bland ND, Bruce S, Coombs GH, Mottram JC, Walkinshaw MD Biochem Biophys Res Commun. 2009 Mar 13;380(3):442-8. Epub 2009 Jan 31. PMID:19187777[1]

From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.

References

  1. Richardson JM, Morrison LS, Bland ND, Bruce S, Coombs GH, Mottram JC, Walkinshaw MD. Structures of Leishmania major orthologues of macrophage migration inhibitory factor. Biochem Biophys Res Commun. 2009 Mar 13;380(3):442-8. Epub 2009 Jan 31. PMID:19187777 doi:http://dx.doi.org/10.1016/j.bbrc.2009.01.030

3fwu, resolution 1.80Å

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