Biological Unit: Showing: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

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 This article explains how to show the biological unit (biological assembly) in a scene in Proteopedia. For background, see [[Biological Unit]] and [[Asymmetric Unit]].
-. Go to the [http://watcut.uwaterloo.ca/cgi-bin/makemultimer/ MakeMultimer Server].
+:1. Go to the [http://watcut.uwaterloo.ca/cgi-bin/makemultimer/ MakeMultimer Server].
-. Submit the [[PDB code]].
+:2. Submit the [[PDB code]].
-. Click on the mm1.pdb link to download the biological assembly PDB file. For example, if you submitted [[1hho]], there will be a link to '''1hho_mm1.pdb'''.
+:3. Click on the mm1.pdb link to download the biological assembly PDB file. For example, if you submitted [[1hho]], there will be a link to '''1hho_mm1.pdb'''.
 :Optionally you may examine all the biological units with the links to [[FirstGlance in Jmol]].
-. Upload the mm1.pdb file into Proteopedia, and use it in a molecular scene, following the instructions at [[Help:Uploading molecules]].
+:4. Upload the mm1.pdb file into Proteopedia, and use it in a molecular scene, following the instructions at [[Help:Uploading molecules]].
 You can also find the MakeMultimer Server with [[FirstGlance in Jmol]]. Every page in Proteopedia titled with a [[PDB code]] has a link to FirstGlance. While viewing the [[asymmetric unit]] in FirstGlance, click on Key Resources, then on Probable Quaternary Structure, and there you will find the link to MakeMultimer.