Exonuclease: Difference between revisions
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== 3D Structures of exonuclease == | == 3D Structures of exonuclease == | ||
''Updated November 2011'' | |||
===ExN-I=== | ===ExN-I=== | ||
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[[2qxf]] - EcExN-I + TMP<br /> | [[2qxf]] - EcExN-I + TMP<br /> | ||
[[3hl8]], [[3hp9]] - EcExN-I + inhibitor<br /> | [[3hl8]], [[3hp9]] - EcExN-I + inhibitor<br /> | ||
[[3c94]] - EcExN-I + DNA-binding C terminal peptide | [[3c94]] - EcExN-I + DNA-binding C terminal peptide<br /> | ||
[[3qe9]] – hExN-I (mutant) + DNA – human<br /> | |||
[[3qea]], [[3qeb]] - hExN-I + DNA | |||
===ExN-III=== | ===ExN-III=== | ||
[[2voa]] – | [[2voa]] – AfExN-III (mutant) + DNA – ''Archaeoglobus fulgidus''<br /> | ||
[[3g1k]] - MtExN-III – ''Methanothermobacter thermaautotrophicus''<br /> | [[3g1k]] - MtExN-III – ''Methanothermobacter thermaautotrophicus''<br /> | ||
[[3g3c]], [[3g4t]] - MtExN-III + DNA<br /> | [[3g3c]], [[3g4t]] - MtExN-III + DNA<br /> | ||
[[3fzi]], [[3g8v]], [[3g91]] - MtExN-III (mutant) <br /> | [[3fzi]], [[3g8v]], [[3g91]] - MtExN-III (mutant) <br /> | ||
[[3g00]], [[3g0r]], [[3g2c]], [[3g2d]], [[3g38]], [[3g3y]], [[3ga6]] - MtExN-III (mutant) + DNA<br /> | [[3g00]], [[3g0r]], [[3g2c]], [[3g2d]], [[3g38]], [[3g3y]], [[3ga6]] - MtExN-III (mutant) + DNA<br /> | ||
[[3g0a]] - MtExN-III (mutant) + Mn | [[3g0a]] - MtExN-III (mutant) + Mn<br /> | ||
[[1ako]] – EcExN-III | |||
===ExN-IV=== | ===ExN-IV=== | ||
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[[3h4r]] - EcExN-VIII C terminal (mutant) | [[3h4r]] - EcExN-VIII C terminal (mutant) | ||
[[1ut5]], [[1ut8]] – 5’-ExN + metal – Bacteriophage T5 | ==Phage ExN=== | ||
[[1ut5]], [[1ut8]] – T5-5’-ExN + metal – Bacteriophage T5<br /> | |||
[[1exn]], [[1xo1]] - T5-5’-ExN (mutant)<br /> | |||
[[1avq]] – BlExN λ (mutant) – Bacteriophage λ<br /> | |||
[[3slp]] - BlExN λ + DNA<br /> | |||
[[3sm4]] - BlExN λ (mutant) + DNA<br /> | |||
[[3k93]] – ExN – Haemophilus somnus | |||
===Exosome complex ExN=== | |||
[[2ba1]] – AfExN Rrp41<br /> | |||
[[2br2]] – SsExN-I + ExN-II – ''Sulfolobus solfataricus''<br /> | |||
[[2jea]], [[2je6]], [[2jeb]] - SsExN-I (mutant) + ExN-II + RNA-binding protein 1<br /> | |||
[[2hbj]], [[2hbk]], [[2hbl]], [[2hbm]] – yExN Rrp6 (mutant) <br /> | |||
[[2ja9]] – yExN Rrp40<br /> | |||
[[2vnu]] – yExN Rrp44 + DNA<br /> | |||
[[2wp8]] - yExN Rrp45, Ski6, Dis3<br /> | |||
[[2ioc]] - hExN Trex1 N terminal<br /> | |||
[[2nn6]] – hExN Rrp41, Rrp45, Rrp42, Rrp40, Prp43, Rrp46, Mtr3, Csl4, Rrp4 | |||
===Various ExN=== | |||
[[1ir6]], [[2zxo]], [[2zxp]], [[2zxr]] – ExN Recj – ''Thermus thermophiles''<br /> | |||
[[1w0h]] – hExn Eri1 nuclease domain <br /> | |||
[[1zbu]] - hExn Eri1<br /> | |||
[[1zbh]] - hExn Eri1 (mutant) + DNA<br /> | |||
[[1y97]] – hExN Trex2<br /> | |||
[[2o4g]] - mExN Trex1 + nucleotide – mouse<br /> | |||
[[3mxj]] - mExN Trex1<br /> | |||
[[2o4i]], [[3mxi]], [[3mxm]] - mExN Trex1 (mutant) + DNA<br /> | |||
[[2oa8]] - mExN Trex1 + DNA<br /> | |||
[[3b6o]], [[3b6p]] - mExN Trex1 + ion inhibitor<br /> | |||
[[2w45]] – H4ExN alkaline - Herpesvirus 4<br /> | |||
[[2w4b]] - H4ExN alkaline (mutant)<br /> | |||
[[3e2v]] – yExN - yeast | |||
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