2h6b: Difference between revisions

New page: left|200px<br /><applet load="2h6b" size="350" color="white" frame="true" align="right" spinBox="true" caption="2h6b, resolution 2.20Å" /> '''Crystal structure of...
 
No edit summary
Line 4: Line 4:


==Overview==
==Overview==
Halorespiration is a bacterial respiratory process in which haloorganic, compounds act as terminal electron acceptors. This process is controlled, at transcriptional level by CprK, a member of the ubiquitous CRP-FNR, family. Here we present the crystal structures of oxidized CprK in, presence of the ligand ortho-chlorophenolacetic acid and of reduced CprK, in absence of this ligand. These structures reveal that highly specific, binding of chlorinated, rather than the corresponding non-chlorinated, phenolic compounds in the NH(2)-terminal beta-barrels causes reorientation, of these domains with respect to the central alpha-helix at the dimer, interface. Unexpectedly, the COOH-terminal DNA-binding domains dimerize in, the non-DNA binding state. We postulate the ligand-induced conformational, change allows formation of interdomain contacts that disrupt the DNA, domain dimer interface and leads to repositioning of the helix-turn-helix, motifs. These structures provide a structural framework for further, studies on transcriptional control by CRP-FNR homologs in general and of, halorespiration regulation by CprK in particular.
Halorespiration is a bacterial respiratory process in which haloorganic compounds act as terminal electron acceptors. This process is controlled at transcriptional level by CprK, a member of the ubiquitous CRP-FNR family. Here we present the crystal structures of oxidized CprK in presence of the ligand ortho-chlorophenolacetic acid and of reduced CprK in absence of this ligand. These structures reveal that highly specific binding of chlorinated, rather than the corresponding non-chlorinated, phenolic compounds in the NH(2)-terminal beta-barrels causes reorientation of these domains with respect to the central alpha-helix at the dimer interface. Unexpectedly, the COOH-terminal DNA-binding domains dimerize in the non-DNA binding state. We postulate the ligand-induced conformational change allows formation of interdomain contacts that disrupt the DNA domain dimer interface and leads to repositioning of the helix-turn-helix motifs. These structures provide a structural framework for further studies on transcriptional control by CRP-FNR homologs in general and of halorespiration regulation by CprK in particular.


==About this Structure==
==About this Structure==
Line 13: Line 13:
[[Category: Desulfitobacterium hafniense]]
[[Category: Desulfitobacterium hafniense]]
[[Category: Protein complex]]
[[Category: Protein complex]]
[[Category: Joyce, M.G.]]
[[Category: Joyce, M G.]]
[[Category: Levy, C.]]
[[Category: Levy, C.]]
[[Category: Leys, D.]]
[[Category: Leys, D.]]
Line 25: Line 25:
[[Category: helix-turn-helix]]
[[Category: helix-turn-helix]]


''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 20:15:16 2008''
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:38:35 2008''

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA