User:Wayne Decatur/Generate Unfolded Structures: Difference between revisions
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* Load the structure into Pymol with all the consoles open. | * Load the structure into Pymol with all the consoles open. | ||
* Toggle in the bottom right corner the text next to 'Selecting' until 'Residues' comes up. ('Selecting' currently shows as 'Picking' in Mac Pymol1.3r1.) | * Toggle in the bottom right corner the text next to 'Selecting' until 'Residues' comes up. ('Selecting' currently shows as 'Picking' in Mac Pymol1.3r1.) | ||
* put the mouse into 3-button editing mode either using 'Mouse' menu in upper console or toggle it by clicking text next to 'Mouse mode'. (On Max currently doing this causes the 'Picking' setting to look like it changes to atoms but holding down control key on the Mac still drags chain around elastic and over time it settles to a form where bonds still constrained to proper length. ) | * put the mouse into 3-button editing mode either using 'Mouse' menu in upper console or toggle it by clicking text next to 'Mouse mode'. (On Max currently doing this causes the 'Picking' setting to look like it changes to atoms but holding down control key on the Mac and dragging with left click still drags chain around elastic and over time it settles to a form where bonds still constrained to proper length. ) | ||
* Click on Auto-Sculpting in the Sculpting menu that is under the Build menu. | * Click on Auto-Sculpting in the Sculpting menu that is under the Build menu. | ||
* Use control-left-click-and-drag to click on the chain of interest and drag to move the chain where you want it to go and it will move towards your mouse like it is trying to catch up but is in viscous solution. | * Use control-left-click-and-drag to click on the chain of interest and drag to move the chain where you want it to go and it will move towards your mouse like it is trying to catch up but is in viscous solution. | ||