Ferredoxin: Difference between revisions

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

Michal Harel, Joel L. Sussman, David Canner, Eran Hodis, Jaime Prilusky, Alexander Berchansky, Wayne Decatur

@@ Line 25: / Line 25: @@
 </StructureSection>
+===3D structures of ferredoxin===
+''Update June 2011''
 ===2Fe-2S containing ferredoxins===
-[[2kaj]], [[1dox]], [[1doy]] – SyFd +Ga – Synechocystis – NMR <br />
+[[2kaj]], [[1dox]], [[1doy]] – SyFd +Ga – S''ynechocystis'' – NMR <br />
 [[3hui]] – Fd – ''Rhodopseudomonas palustris'' <br />
 [[1off]] – SyFd  <br />
@@ Line 37: / Line 40: @@
 [[2i7f]], [[1uwm]] - RcFd  – ''Rhodobacter capsulatus'' <br />
 [[1e9m]] – RcFd - NMR<br />
-[[1rfk]], [[3p63]] - Fd – Cyanobacterium ''masticogladus laminosus'' <br />
+[[1rfk]], [[3p63]] - Fd – ''Cyanobacterium'' ''masticogladus laminosus'' <br />
 [[1vck]] - Fd – ''Pseudomonas resinovorans'' <br />
-[[1wri]], [[1frr]] - Fd – Equisetum arvense <br />
+[[1wri]], [[1frr]] - Fd – E''quisetum arvense'' <br />
 [[1sjg]] - PmFd– NMR <br />
-[[1iue]] - Fd– Plasmodium falciparum <br />
+[[1iue]] - Fd– ''Plasmodium falciparum'' <br />
-[[1m2a]] –AeFd – Aquifex aeolicus <br />
+[[1m2a]] – AeFd – ''Aquifex aeolicu''s <br />
 [[1m2b]], [[1m2d]], [[1f37]], [[1f5b]], [[1f5c]] – AeFd (mutant) <br />
-[[1l5p]] – Fd –  Trichomonas vaginalis <br />
+[[1l5p]] – Fd –  ''Trichomonas vaginali''s <br />
-[[1i7h]] - Fd  – Escherichia coli <br />
+[[1i7h]] - Fd  – ''Escherichia coli'' <br />
-[[1czp]], [[1qt9]], [[1frd]], [[1fxa]] - aFd– anabaena <br />
+[[1czp]], [[1qt9]], [[1frd]], [[1fxa]] - aFd– ''anabaena'' <br />
 [[1j7a]], [[1j7b]], [[1j7c]] , [[1qoa]], [[1qob]], [[1qof]], [[1qog]]- aFd  (mutant)  <br />
-[[1e0z]] – Fd – Halobacterium salinarium <br />
+[[1e0z]] – Fd – ''Halobacterium salinarium'' <br />
-[[1pfd]] – Fd – Petroselinum crispum – NMR <br />
+[[1pfd]] – Fd – ''Petroselinum crispum'' – NMR <br />
-[[1a70]] - Fd  (mutant) – Spinacia oleracea <br />
+[[1a70]] - Fd  (mutant) – ''Spinacia oleracea'' <br />
-[[1awd]] - Fd  – Chlorella fusca <br />
+[[1awd]] - Fd  – ''Chlorella fusca'' <br />
 [[2cjn]], [[2cjo]], [[1roe]] – SyFd – NMR <br />
-[[1rof]] – SyFd – Synechococcus elongates <br />
+[[1rof]] – SyFd – ''Synechococcus elongates'' <br />
-[[1doi]] - Fd  – Haloarcula marismortui <br />
+[[1doi]] - Fd  – ''Haloarcula marismortui'' <br />
-[[4fxc]] – Fd – Spirulina platensis <br />
+[[4fxc]] – Fd – ''Spirulina platensi''s <br />
-[[1fxi]] – Fd – Aphanothece sacrum <br />
+[[1fxi]] – Fd – ''Aphanothece sacrum'' <br />
-[[3dqy]], [[2qpz]] - Fd  – Pseudomonas putida <br />
+[[3dqy]], [[2qpz]], 3ah7]] - Fd  – ''Pseudomonas putida'' <br />
 [[3ab5]] – Fd – ''Cyanidioschyzon merolae''
 ===4Fe-4S containing ferredoxins ===
-[[3eun]] – AvFd  – Allochromatium vinosum <br />
+[[3eun]] – AvFd  – ''Allochromatium vinosum'' <br />
 [[3exy]] - AvFd (mutant) <br />
-[[2vkr]] - Fd+Zn – Acidianus ambivalens <br />
+[[2vkr]] - Fd+Zn – ''Acidianus ambivalens'' <br />
-[[2z8q]] - PfFd (mutant) – Pyrococcus furiosus <br />
+[[2z8q]] - PfFd (mutant) – ''Pyrococcus furiosus'' <br />
-[[1siz]] - PfFd
+[[1siz]] - PfFd<br >
-[[2fgo]] - Fd– Pseudomonas aeruginosa <br />
+[[3pni]] - PfFd (mutant)<br />
-[[1iqz]], [[1ir0]] - BtFd   – Bacillus thermoproteolyticus <br />
+[[2fgo]] - Fd– ''Pseudomonas aeruginosa'' <br />
-[[1rgv]] - Fd  – Thauera aromatica <br />
+[[1iqz]], [[1ir0]] - BtFd   – ''Bacillus thermoproteolyticus'' <br />
-[[1dax]], [[1dfd]] – DaFd – Desulfovibrio africanus – NMR <br />
+[[1rgv]] - Fd  – ''Thauera aromatica'' <br />
+[[1dax]], [[1dfd]] – DaFd – ''Desulfovibrio africanus'' – NMR <br />
 [[1fxr]] - DaFd  <br />
-[[1vjw]] – Fd – Thermotoga maritima <br />
+[[1vjw]] – Fd – ''Thermotoga maritima'' <br />
 ===3Fe-4S containing ferredoxins===
-[[2v2k]] – Fd – Mycobacterium smegmatis <br />
+[[2v2k]] – Fd – ''Mycobacterium smegmatis'' <br />
 [[1wtf]] - BtFd (mutant)  <br />
 [[1sj1]] - PfFd  <br />
-[[1fxd]] - DgFd  – Desulfovibrio gigas <br />
+[[1fxd]] - DgFd  – ''Desulfovibrio gigas'' <br />
 [[1f2g]] – DgFd – NMR <br />
-[[1xer]] - Fd  – Sulfolobus tokodaii <br />
+[[1xer]] - Fd  – ''Sulfolobus tokodaii'' <br />
 ===4Fe-4S+3Fe-4S containing ferredoxins===
-[[1gao]], [[6fdr]], [[7fd1]], [[7fdr]], [[1axq]], [[6fd1]], [[1frh]], [[1fri]],[[1frj]], [[1frk]], [[1frl]], [[1frm]], [[1fda]], [[1fdb]], [[1fdd]], [[5fd1]], [[1fer]] – AvFd – Azotobacter vinelandii <br />
+[[1gao]], [[6fdr]], [[7fd1]], [[7fdr]], [[1axq]], [[6fd1]], [[1frh]], [[1fri]],[[1frj]], [[1frk]], [[1frl]], [[1frm]], [[1fda]], [[1fdb]], [[1fdd]], [[5fd1]], [[1fer]] – AvFd – ''Azotobacter vinelandii'' <br />
 [[1pc4]], [[1pc5]], [[1g6b]], [[1g3o]], [[1ff2]], [[1b0v]], [[1d3w]], [[1b0t]], [[1a6l]], [[1ftc]], [[1frx]], [[2fd2]], [[1fd2]] - AvFd  (mutant)  <br />
 [[1h98]] – Fd – ''Thermus thermophilus'' <br />
@@ Line 110: / Line 114: @@
 ===Putidaredoxin===
-[[1yji]], [[1yjj]], [[1pdx]] – PpPUT – Pseudomonas putida – NMR <br />
+[[1yji]], [[1yjj]], [[1pdx]] – PpPUT – NMR <br />
 [[3lb8]] – PpPUT (mutant)+PUT reductase <br />
 [[1xln]], [[1xlo]], [[1xlp]], [[1xlq]], [[1r7s]], [[1oqq]], [[1oqr]] - PpPUT (mutant) <br />
@@ Line 117: / Line 121: @@
 ===Terpredoxin===
-[[1b9r]] – TER – Pseudomonas - NMR <br />
+[[1b9r]] – TER – ''Pseudomonas'' - NMR <br />
 ==Reference==