Help:Color Keys: Difference between revisions
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{{Template:ColorKey_Hydrophobic}}, {{Template:ColorKey_Polar}} | {{Template:ColorKey_Hydrophobic}}, {{Template:ColorKey_Polar}} | ||
</big></blockquote> | </big></blockquote> | ||
In Proteopedia's [[SAT]] is a button ''hydrophobic/polar''. It applies these two colors according to the definitions built into Jmol: | |||
*Hydrophobic: Ala, Cys, Gly, Ile, Leu, Met, Phe, Pro, Trp, Tyr, Val. | |||
*Polar: Arg, Asn, Asp, Gln, Glu, His, Lys, Ser, Thr. | |||
Jmol's categories attempt to categorize the sidechains as to their predominant characteristic. This is an oversimplification as Trp and Tyr have polar atoms; Arg, Gln, Glu, Lys have several aliphatic carbons, and His has an aromatic ring. | |||
===Charge=== | ===Charge=== | ||