User:Wayne Decatur/Biochem642 Molecular Visualization Sessions: Difference between revisions
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*[http://www.bioinformatics.org/jmol-tutorials/jtat/_docs/jmol_app.htm Jmol Application] | *[http://www.bioinformatics.org/jmol-tutorials/jtat/_docs/jmol_app.htm Jmol Application] | ||
*Pymol | *Pymol | ||
*[http://polyview.cchmc.org/polyview3d.html Polyview-3D], fancy Pymol views made super easy. | *[http://polyview.cchmc.org/polyview3d.html Polyview-3D], fancy Pymol views and animations made super easy. | ||
*Swiss-pdb Viewer a.k.a Deep View | *Swiss-pdb Viewer a.k.a Deep View | ||
*Protein Explorer | *Protein Explorer | ||
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*[http://chemapps.stolaf.edu/jmol/docs/ Jmol Command Reference Manual] for advanced scene authoring in Jmol using commands because [http://www.bioinformatics.org/jmol-tutorials/jtat/_docs/jtatdocs.htm#directscripting direct scripting works for Proteopedia too]. | *[http://chemapps.stolaf.edu/jmol/docs/ Jmol Command Reference Manual] for advanced scene authoring in Jmol using commands because [http://www.bioinformatics.org/jmol-tutorials/jtat/_docs/jtatdocs.htm#directscripting direct scripting works for Proteopedia too]. | ||
*[http://www.bioinformatics.org/jmol-tutorials/jtat/_docs/index.htm Jmol Tutorial-Authoring Template (JTAT)] describes and works for developing and viewing scenes offline or developing and viewing privately. | *[http://www.bioinformatics.org/jmol-tutorials/jtat/_docs/index.htm Jmol Tutorial-Authoring Template (JTAT)] describes and works for developing and viewing scenes offline or developing and viewing privately. | ||
*[http://polyview.cchmc.org/polyview3d.html Polyview-3D], fancy Pymol views and animations made super easy. | |||
*[http://www.weizmann.ac.il/ISPC/eMovie.html eMovie],a PyMOL plug-in for macromolecular movie-making. | *[http://www.weizmann.ac.il/ISPC/eMovie.html eMovie],a PyMOL plug-in for macromolecular movie-making. | ||