3hoj: Difference between revisions

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OCA

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-{{Seed}}
-[[Image:3hoj.png|left|200px]]
-<!--
+==Crystal Structure of a Novel Engineered Retroaldolase: RA-22==
-The line below this paragraph, containing "STRUCTURE_3hoj", creates the "Structure Box" on the page.
+<StructureSection load='3hoj' size='340' side='right'caption='[[3hoj]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3hoj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3b5v 3b5v]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HOJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HOJ FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hoj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hoj OCA], [https://pdbe.org/3hoj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hoj RCSB], [https://www.ebi.ac.uk/pdbsum/3hoj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hoj ProSAT]</span></td></tr>
-{{STRUCTURE_3hoj|  PDB=3hoj  |  SCENE=  }}
+</table>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ho/3hoj_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hoj ConSurf].
+<div style="clear:both"></div>
-===Crystal Structure of a Novel Engineered Retroaldolase: RA-22===
+==See Also==
+*[[Aldolase 3D structures|Aldolase 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_18323453}}, adds the Publication Abstract to the page
+[[Category: Large Structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 18323453 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_18323453}}
-==About this Structure==
-HOJ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3b5v 3b5v]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HOJ OCA].
-==Reference==
-<ref group="xtra">PMID:18323453</ref><references group="xtra"/>
-[[Category: Indole-3-glycerol-phosphate synthase]]
 [[Category: Synthetic construct]]
-[[Category: Doyle, L A.]]
+[[Category: Doyle LA]]
-[[Category: Stoddard, B L.]]
+[[Category: Stoddard BL]]
-[[Category: Engineered computationally designed]]
-[[Category: Lyase]]
-[[Category: Retroaldolase]]
-[[Category: Tim barrel]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 21 19:27:57 2009''