3irs: Difference between revisions

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==CRYSTAL STRUCTURE OF UNCHARACTERIZED TIM-BARREL PROTEIN BB4693 FROM Bordetella bronchiseptica==
The line below this paragraph, containing "STRUCTURE_3irs", creates the "Structure Box" on the page.
<StructureSection load='3irs' size='340' side='right'caption='[[3irs]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3irs]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bordetella_bronchiseptica Bordetella bronchiseptica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IRS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IRS FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.76&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_3irs|  PDB=3irs  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3irs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3irs OCA], [https://pdbe.org/3irs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3irs RCSB], [https://www.ebi.ac.uk/pdbsum/3irs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3irs ProSAT]</span></td></tr>
 
</table>
===CRYSTAL STRUCTURE OF UNCHARACTERIZED TIM-BARREL PROTEIN BB4693 FROM Bordetella bronchiseptica===
== Function ==
 
[https://www.uniprot.org/uniprot/A0A0H3M034_BORBR A0A0H3M034_BORBR]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3IRS is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Bordetella_bronchiseptica Bordetella bronchiseptica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IRS OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ir/3irs_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3irs ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Bordetella bronchiseptica]]
[[Category: Bordetella bronchiseptica]]
[[Category: Almo, S C.]]
[[Category: Large Structures]]
[[Category: Burley, S K.]]
[[Category: Almo SC]]
[[Category: Dickey, M.]]
[[Category: Burley SK]]
[[Category: Do, J.]]
[[Category: Dickey M]]
[[Category: Foti, R.]]
[[Category: Do J]]
[[Category: Malashkevich, V.]]
[[Category: Foti R]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
[[Category: Malashkevich V]]
[[Category: Patskovsky, Y.]]
[[Category: Patskovsky Y]]
[[Category: Raushel, F M.]]
[[Category: Raushel FM]]
[[Category: Sauder, J M.]]
[[Category: Sauder JM]]
[[Category: Toro, R.]]
[[Category: Toro R]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Nysgxrc]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Tim-barrel protein]]
[[Category: Uncharacterized protein]]
[[Category: Unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Sep  3 16:18:55 2009''

Latest revision as of 13:06, 21 February 2024

CRYSTAL STRUCTURE OF UNCHARACTERIZED TIM-BARREL PROTEIN BB4693 FROM Bordetella bronchisepticaCRYSTAL STRUCTURE OF UNCHARACTERIZED TIM-BARREL PROTEIN BB4693 FROM Bordetella bronchiseptica

Structural highlights

3irs is a 3 chain structure with sequence from Bordetella bronchiseptica. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.76Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

A0A0H3M034_BORBR

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3irs, resolution 1.76Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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