3hqx: Difference between revisions

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-{{Seed}}
-[[Image:3hqx.jpg|left|200px]]
-<!--
+==Crystal structure of protein of unknown function (DUF1255,PF06865) from Acinetobacter sp. ADP1==
-The line below this paragraph, containing "STRUCTURE_3hqx", creates the "Structure Box" on the page.
+<StructureSection load='3hqx' size='340' side='right'caption='[[3hqx]], [[Resolution|resolution]] 1.66&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3hqx]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acinetobacter_baylyi_ADP1 Acinetobacter baylyi ADP1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HQX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HQX FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.66&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-{{STRUCTURE_3hqx|  PDB=3hqx  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hqx OCA], [https://pdbe.org/3hqx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hqx RCSB], [https://www.ebi.ac.uk/pdbsum/3hqx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hqx ProSAT], [https://www.topsan.org/Proteins/MCSG/3hqx TOPSAN]</span></td></tr>
+</table>
-===Crystal structure of protein of unknown function (DUF1255,PF06865) from Acinetobacter sp. ADP1===
+== Function ==
+[https://www.uniprot.org/uniprot/PPNP_ACIAD PPNP_ACIAD] Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.[HAMAP-Rule:MF_01537]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-HQX is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Acinetobacter_sp._adp1 Acinetobacter sp. adp1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HQX OCA].
+Check<jmol>
-[[Category: Acinetobacter sp. adp1]]
+  <jmolCheckbox>
-[[Category: Dauter, Z.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hq/3hqx_consurf.spt"</scriptWhenChecked>
-[[Category: Freeman, L.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: Hatzos, C.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Joachimiak, A.]]
+  </jmolCheckbox>
-[[Category: MCSG, Midwest Center for Structural Genomics.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hqx ConSurf].
-[[Category: Nocek, B.]]
+<div style="clear:both"></div>
-[[Category: Duf1255]]
+__TOC__
-[[Category: Mcsg]]
+</StructureSection>
-[[Category: Midwest center for structural genomic]]
+[[Category: Acinetobacter baylyi ADP1]]
-[[Category: Pf06865]]
+[[Category: Large Structures]]
-[[Category: Protein structure initiative]]
+[[Category: Dauter Z]]
-[[Category: Psi2]]
+[[Category: Freeman L]]
-[[Category: Structural genomic]]
+[[Category: Hatzos C]]
-[[Category: Unknown function]]
+[[Category: Joachimiak A]]
+[[Category: Nocek B]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jul  1 09:43:02 2009''