1rlh: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:1rlh.jpg|left|200px]]<br /><applet load="1rlh" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="1rlh, resolution 1.80&Aring;" />
-'''Structure of a conserved protein from Thermoplasma acidophilum'''<br />
-==About this Structure==
+==Structure of a conserved protein from Thermoplasma acidophilum==
-RLH is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermoplasma_acidophilum Thermoplasma acidophilum] with NA as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1RLH OCA].
+<StructureSection load='1rlh' size='340' side='right'caption='[[1rlh]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-[[Category: Single protein]]
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1rlh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoplasma_acidophilum Thermoplasma acidophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RLH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RLH FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rlh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rlh OCA], [https://pdbe.org/1rlh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rlh RCSB], [https://www.ebi.ac.uk/pdbsum/1rlh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rlh ProSAT], [https://www.topsan.org/Proteins/MCSG/1rlh TOPSAN]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q9HII6_THEAC Q9HII6_THEAC]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rl/1rlh_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1rlh ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Thermoplasma acidophilum]]
-[[Category: Cuff, M.E.]]
+[[Category: Cuff ME]]
-[[Category: Edwards, A.]]
+[[Category: Edwards A]]
-[[Category: Joachimiak, A.]]
+[[Category: Joachimiak A]]
-[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
+[[Category: Savchenko A]]
-[[Category: Savchenko, A.]]
+[[Category: Xu X]]
-[[Category: Xu, X.]]
-[[Category: NA]]
-[[Category: mcsg]]
-[[Category: midwest center for structural genomics]]
-[[Category: protein structure initiative]]
-[[Category: psi]]
-[[Category: structural genomics]]
-[[Category: t. acidophilum]]
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sat Nov 24 22:53:51 2007''