3de9: Difference between revisions

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[[Image:3de9.png|left|200px]]


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==Crystal Structure of a Trimeric Cytochrome cb562 Assembly Induced by Nickel Coordination==
The line below this paragraph, containing "STRUCTURE_3de9", creates the "Structure Box" on the page.
<StructureSection load='3de9' size='340' side='right'caption='[[3de9]], [[Resolution|resolution]] 2.04&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3de9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DE9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DE9 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.04&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
{{STRUCTURE_3de9| PDB=3de9 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3de9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3de9 OCA], [https://pdbe.org/3de9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3de9 RCSB], [https://www.ebi.ac.uk/pdbsum/3de9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3de9 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/C562_ECOLX C562_ECOLX] Electron-transport protein of unknown function.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/de/3de9_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3de9 ConSurf].
<div style="clear:both"></div>


===Crystal Structure of a Trimeric Cytochrome cb562 Assembly Induced by Nickel Coordination===
==See Also==
 
*[[Cytochrome C 3D structures|Cytochrome C 3D structures]]
 
*[[Cytochrome b5 3D structures|Cytochrome b5 3D structures]]
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{{ABSTRACT_PUBMED_19267481}}
 
==About this Structure==
3DE9 is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DE9 OCA].
 
==Reference==
<ref group="xtra">PMID:19267481</ref><references group="xtra"/>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Lewis, R A.]]
[[Category: Large Structures]]
[[Category: Rheingold, A L.]]
[[Category: Lewis RA]]
[[Category: Salgado, E N.]]
[[Category: Rheingold AL]]
[[Category: Tezcan, F A.]]
[[Category: Salgado EN]]
[[Category: Electron transport]]
[[Category: Tezcan FA]]
[[Category: Heme]]
[[Category: Iron]]
[[Category: Metal binding protein]]
[[Category: Metal-binding]]
[[Category: Ni-stabilized trimeric superstructure]]
[[Category: Periplasm]]
[[Category: Transport]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed May  6 10:14:56 2009''

Latest revision as of 12:41, 21 February 2024

Crystal Structure of a Trimeric Cytochrome cb562 Assembly Induced by Nickel CoordinationCrystal Structure of a Trimeric Cytochrome cb562 Assembly Induced by Nickel Coordination

Structural highlights

3de9 is a 1 chain structure with sequence from Escherichia coli. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.04Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

C562_ECOLX Electron-transport protein of unknown function.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3de9, resolution 2.04Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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