3cfa: Difference between revisions

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[[Image:3cfa.jpg|left|200px]]


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==Anemonia sulcata red fluorescent protein asRFP==
The line below this paragraph, containing "STRUCTURE_3cfa", creates the "Structure Box" on the page.
<StructureSection load='3cfa' size='340' side='right'caption='[[3cfa]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3cfa]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Anemonia_sulcata Anemonia sulcata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CFA OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CFA FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CME:S,S-(2-HYDROXYETHYL)THIOCYSTEINE'>CME</scene>, <scene name='pdbligand=NRQ:{(4Z)-4-(4-HYDROXYBENZYLIDENE)-2-[3-(METHYLTHIO)PROPANIMIDOYL]-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL}ACETIC+ACID'>NRQ</scene></td></tr>
{{STRUCTURE_3cfa| PDB=3cfa |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cfa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cfa OCA], [https://pdbe.org/3cfa PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cfa RCSB], [https://www.ebi.ac.uk/pdbsum/3cfa PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cfa ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/NFCP_ANESU NFCP_ANESU] Pigment protein that is intensely purple in color.<ref>PMID:10852900</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cf/3cfa_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cfa ConSurf].
<div style="clear:both"></div>


===Anemonia sulcata red fluorescent protein asRFP===
==See Also==
 
*[[Green Fluorescent Protein 3D structures|Green Fluorescent Protein 3D structures]]
 
== References ==
==About this Structure==
<references/>
3CFA is a 8 chains structure of sequences from [http://en.wikipedia.org/wiki/Anemonia_sulcata Anemonia sulcata]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CFA OCA].
__TOC__
</StructureSection>
[[Category: Anemonia sulcata]]
[[Category: Anemonia sulcata]]
[[Category: Bartunik, H D.]]
[[Category: Large Structures]]
[[Category: Gundel, S.]]
[[Category: Bartunik HD]]
[[Category: Kachalova, G S.]]
[[Category: Gundel S]]
[[Category: Wiedenmann, J.]]
[[Category: Kachalova GS]]
[[Category: Beta barrel]]
[[Category: Wiedenmann J]]
[[Category: Fluorescent protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 11 11:22:52 2009''

Latest revision as of 17:57, 1 November 2023

Anemonia sulcata red fluorescent protein asRFPAnemonia sulcata red fluorescent protein asRFP

Structural highlights

3cfa is a 8 chain structure with sequence from Anemonia sulcata. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.75Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

NFCP_ANESU Pigment protein that is intensely purple in color.[1]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

References

  1. ↑ Lukyanov KA, Fradkov AF, Gurskaya NG, Matz MV, Labas YA, Savitsky AP, Markelov ML, Zaraisky AG, Zhao X, Fang Y, Tan W, Lukyanov SA. Natural animal coloration can Be determined by a nonfluorescent green fluorescent protein homolog. J Biol Chem. 2000 Aug 25;275(34):25879-82. PMID:10852900 doi:http://dx.doi.org/10.1074/jbc.C000338200

3cfa, resolution 1.75Å

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