1ggv: Difference between revisions

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-{{Seed}}
-[[Image:1ggv.png|left|200px]]
-<!--
+==CRYSTAL STRUCTURE OF THE C123S MUTANT OF DIENELACTONE HYDROLASE (DLH) BOUND WITH THE PMS MOIETY OF THE PROTEASE INHIBITOR, PHENYLMETHYLSULFONYL FLUORIDE (PMSF)==
-The line below this paragraph, containing "STRUCTURE_1ggv", creates the "Structure Box" on the page.
+<StructureSection load='1ggv' size='340' side='right'caption='[[1ggv]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1ggv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GGV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1GGV FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SEB:O-BENZYLSULFONYL-SERINE'>SEB</scene></td></tr>
-{{STRUCTURE_1ggv|  PDB=1ggv  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ggv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ggv OCA], [https://pdbe.org/1ggv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ggv RCSB], [https://www.ebi.ac.uk/pdbsum/1ggv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ggv ProSAT]</span></td></tr>
+</table>
-===CRYSTAL STRUCTURE OF THE C123S MUTANT OF DIENELACTONE HYDROLASE (DLH) BOUND WITH THE PMS MOIETY OF THE PROTEASE INHIBITOR, PHENYLMETHYLSULFONYL FLUORIDE (PMSF)===
+== Function ==
+[https://www.uniprot.org/uniprot/CLCD_PSEPU CLCD_PSEPU] Ring cleavage of cyclic ester dienelactone to produce maleylacetate.
+== Evolutionary Conservation ==
-<!--
+[[Image:Consurf_key_small.gif|200px|right]]
-The line below this paragraph, {{ABSTRACT_PUBMED_11053834}}, adds the Publication Abstract to the page
+Check<jmol>
-(as it appears on PubMed at http://www.pubmed.gov), where 11053834 is the PubMed ID number.
+  <jmolCheckbox>
--->
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gg/1ggv_consurf.spt"</scriptWhenChecked>
-{{ABSTRACT_PUBMED_11053834}}
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-GGV is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1GGV OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ggv ConSurf].
+<div style="clear:both"></div>
-==Reference==
+__TOC__
-<ref group="xtra">PMID:11053834</ref><references group="xtra"/>
+</StructureSection>
-[[Category: Carboxymethylenebutenolidase]]
+[[Category: Large Structures]]
 [[Category: Pseudomonas putida]]
-[[Category: Barton, J D.]]
+[[Category: Barton JD]]
-[[Category: Carr, P D.]]
+[[Category: Carr PD]]
-[[Category: Edwards, K J.]]
+[[Category: Edwards KJ]]
-[[Category: Ewart, G D.]]
+[[Category: Ewart GD]]
-[[Category: Ollis, D L.]]
+[[Category: Ollis DL]]
-[[Category: Robinson, A.]]
+[[Category: Robinson A]]
-[[Category: Alpha/beta hydrolase fold]]
-[[Category: Dienelactone hydrolase]]
-[[Category: Pmsf]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 09:07:27 2009''