2haf: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2haf.gif|left|200px]]<br /><applet load="2haf" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="2haf, resolution 2.88&Aring;" />
-'''Crystal structure of a putative translation repressor from Vibrio cholerae'''<br />
-==About this Structure==
+==Crystal structure of a putative translation repressor from Vibrio cholerae==
-HAF is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2HAF OCA].
+<StructureSection load='2haf' size='340' side='right'caption='[[2haf]], [[Resolution|resolution]] 2.88&Aring;' scene=''>
-[[Category: Single protein]]
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2haf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae Vibrio cholerae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HAF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HAF FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.88&#8491;</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2haf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2haf OCA], [https://pdbe.org/2haf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2haf RCSB], [https://www.ebi.ac.uk/pdbsum/2haf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2haf ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2haf TOPSAN]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Y467_VIBCH Y467_VIBCH]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ha/2haf_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2haf ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Vibrio cholerae]]
-[[Category: Burley, S.K.]]
+[[Category: Burley SK]]
-[[Category: Kumaran, D.]]
+[[Category: Kumaran D]]
-[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
+[[Category: Seetharaman J]]
-[[Category: Seetharaman, J.]]
+[[Category: Sugadev R]]
-[[Category: Sugadev, R.]]
+[[Category: Swaminathan S]]
-[[Category: Swaminathan, S.]]
-[[Category: alpha/beta]]
-[[Category: new york structural genomix research consortium]]
-[[Category: nysgxrc]]
-[[Category: protein structure initiative]]
-[[Category: psi]]
-[[Category: structural genomics]]
-[[Category: translation repressor]]
-[[Category: x-ray crystallography]]
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 11:38:35 2007''