2a08: Difference between revisions

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[[Image:2a08.png|left|200px]]


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==Structure of the yeast YHH6 SH3 domain==
The line below this paragraph, containing "STRUCTURE_2a08", creates the "Structure Box" on the page.
<StructureSection load='2a08' size='340' side='right'caption='[[2a08]], [[Resolution|resolution]] 1.54&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2a08]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A08 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2A08 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.54&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2a08 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2a08 OCA], [https://pdbe.org/2a08 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2a08 RCSB], [https://www.ebi.ac.uk/pdbsum/2a08 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2a08 ProSAT]</span></td></tr>
{{STRUCTURE_2a08|  PDB=2a08  |  SCENE=  }}
</table>
 
== Function ==
===Structure of the yeast YHH6 SH3 domain===
[https://www.uniprot.org/uniprot/YSC84_YEAST YSC84_YEAST] Essential for the organization of the actin cytoskeleton, fluid phase endocytosis and vesicle trafficking, together with LSB5.<ref>PMID:12388763</ref>
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2A08 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2A08 OCA].  
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a0/2a08_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2a08 ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Kursula, I.]]
[[Category: Kursula I]]
[[Category: Kursula, P]]
[[Category: Kursula P]]
[[Category: Lehmann, F.]]
[[Category: Lehmann F]]
[[Category: Song, Y H.]]
[[Category: Song YH]]
[[Category: Wilmanns, M.]]
[[Category: Wilmanns M]]
[[Category: Zou, P.]]
[[Category: Zou P]]
[[Category: Sh3 domain]]
[[Category: Structural genomic]]
[[Category: Yeast]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 05:22:35 2009''

Latest revision as of 10:17, 23 August 2023

Structure of the yeast YHH6 SH3 domainStructure of the yeast YHH6 SH3 domain

Structural highlights

2a08 is a 2 chain structure with sequence from Saccharomyces cerevisiae. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.54Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

YSC84_YEAST Essential for the organization of the actin cytoskeleton, fluid phase endocytosis and vesicle trafficking, together with LSB5.[1]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

References

  1. ↑ Dewar H, Warren DT, Gardiner FC, Gourlay CG, Satish N, Richardson MR, Andrews PD, Ayscough KR. Novel proteins linking the actin cytoskeleton to the endocytic machinery in Saccharomyces cerevisiae. Mol Biol Cell. 2002 Oct;13(10):3646-61. PMID:12388763 doi:http://dx.doi.org/10.1091/mbc.E02-05-0262

2a08, resolution 1.54Å

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