1jev: Difference between revisions

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{{Seed}}
[[Image:1jev.png|left|200px]]


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==OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KWK==
The line below this paragraph, containing "STRUCTURE_1jev", creates the "Structure Box" on the page.
<StructureSection load='1jev' size='340' side='right'caption='[[1jev]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1jev]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Typhimurium Salmonella enterica subsp. enterica serovar Typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JEV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1JEV FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=IUM:URANYL+(VI)+ION'>IUM</scene></td></tr>
{{STRUCTURE_1jev| PDB=1jev |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1jev FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1jev OCA], [https://pdbe.org/1jev PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1jev RCSB], [https://www.ebi.ac.uk/pdbsum/1jev PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1jev ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/OPPA_SALTY OPPA_SALTY] This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, it binds peptides up to five amino acids long with high affinity.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/je/1jev_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1jev ConSurf].
<div style="clear:both"></div>


===OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KWK===
==See Also==
 
*[[ABC transporter 3D structures|ABC transporter 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
1JEV is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Salmonella_typhimurium Salmonella typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1JEV OCA].
[[Category: Large Structures]]
 
[[Category: Salmonella enterica subsp. enterica serovar Typhimurium]]
==Reference==
[[Category: Tame J]]
<ref group="xtra">PMID:8946852</ref><references group="xtra"/>
[[Category: Wilkinson AJ]]
[[Category: Salmonella typhimurium]]
[[Category: Tame, J.]]
[[Category: Wilkinson, A J.]]
[[Category: Peptide transport]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 04:06:07 2009''

Latest revision as of 10:28, 23 October 2024

OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KWKOLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KWK

Structural highlights

1jev is a 2 chain structure with sequence from Salmonella enterica subsp. enterica serovar Typhimurium. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.3Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

OPPA_SALTY This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, it binds peptides up to five amino acids long with high affinity.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1jev, resolution 1.30Å

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