1z3r: Difference between revisions

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-{{Seed}}
-[[Image:1z3r.png|left|200px]]
-<!--
+==Solution structure of the Omsk Hemhorraghic Fever Envelope Protein Domain III==
-The line below this paragraph, containing "STRUCTURE_1z3r", creates the "Structure Box" on the page.
+<StructureSection load='1z3r' size='340' side='right'caption='[[1z3r]]' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1z3r]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Omsk_hemorrhagic_fever_virus Omsk hemorrhagic fever virus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z3R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z3R FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 15 models</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z3r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z3r OCA], [https://pdbe.org/1z3r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z3r RCSB], [https://www.ebi.ac.uk/pdbsum/1z3r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z3r ProSAT]</span></td></tr>
-{{STRUCTURE_1z3r|  PDB=1z3r  |  SCENE=  }}
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q80J37_OHFV Q80J37_OHFV]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z3/1z3r_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z3r ConSurf].
+<div style="clear:both"></div>
+<div style="background-color:#fffaf0;">
+== Publication Abstract from PubMed ==
+We have solved the NMR solution structure of domain III from the Omsk hemorrhagic fever virus envelope protein and report the first sequencing of the Guriev strain of this virus. Important structural differences between tick-borne flaviviruses, such as OHFV and TBE, and mosquito-borne flaviviruses, such as West Nile virus, are discussed.
-===Solution structure of the Omsk Hemhorraghic Fever Envelope Protein Domain III===
+Structure of the envelope protein domain III of Omsk hemorrhagic fever virus.,Volk DE, Chavez L, Beasley DW, Barrett AD, Holbrook MR, Gorenstein DG Virology. 2006 Jul 20;351(1):188-95. Epub 2006 May 2. PMID:16647096<ref>PMID:16647096</ref>
+From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-<!--
+</div>
-The line below this paragraph, {{ABSTRACT_PUBMED_16647096}}, adds the Publication Abstract to the page
+<div class="pdbe-citations 1z3r" style="background-color:#fffaf0;"></div>
-(as it appears on PubMed at http://www.pubmed.gov), where 16647096 is the PubMed ID number.
+== References ==
--->
+<references/>
-{{ABSTRACT_PUBMED_16647096}}
+__TOC__
+</StructureSection>
-==About this Structure==
+[[Category: Large Structures]]
-Z3R is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Omsk_hemorrhagic_fever_virus Omsk hemorrhagic fever virus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z3R OCA].
-==Reference==
-<ref group="xtra">PMID:16647096</ref><references group="xtra"/>
 [[Category: Omsk hemorrhagic fever virus]]
-[[Category: Barrett, A D.]]
+[[Category: Barrett AD]]
-[[Category: Beasley, D W.]]
+[[Category: Beasley DW]]
-[[Category: Chavez, L.]]
+[[Category: Chavez L]]
-[[Category: Gorenstein, D G.]]
+[[Category: Gorenstein DG]]
-[[Category: Volk, D E.]]
+[[Category: Volk DE]]
-[[Category: Envelope protein]]
-[[Category: Flavivirus domain iii]]
-[[Category: Ohf]]
-[[Category: Omsk hemorrhagic fever]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 18 00:42:21 2009''