2qtk: Difference between revisions

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{{Seed}}
[[Image:2qtk.png|left|200px]]


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==Crystal Structure of the outer membrane protein opdK from Pseudomonas aeruginosa==
The line below this paragraph, containing "STRUCTURE_2qtk", creates the "Structure Box" on the page.
<StructureSection load='2qtk' size='340' side='right'caption='[[2qtk]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2qtk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QTK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QTK FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C8E:(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE'>C8E</scene></td></tr>
{{STRUCTURE_2qtk| PDB=2qtk |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qtk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qtk OCA], [https://pdbe.org/2qtk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qtk RCSB], [https://www.ebi.ac.uk/pdbsum/2qtk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qtk ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9HUR5_PSEAE Q9HUR5_PSEAE]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qt/2qtk_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qtk ConSurf].
<div style="clear:both"></div>


===Crystal Structure of the outer membrane protein opdK from Pseudomonas aeruginosa===
==See Also==
 
*[[Porin 3D structures|Porin 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_18611376}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 18611376 is the PubMed ID number.
[[Category: Pseudomonas aeruginosa PAO1]]
-->
[[Category: Biswas S]]
{{ABSTRACT_PUBMED_18611376}}
[[Category: Van den Berg B]]
 
==About this Structure==
2QTK is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QTK OCA].
 
==Reference==
<ref group="xtra">PMID:18611376</ref><references group="xtra"/>
[[Category: Pseudomonas aeruginosa]]
[[Category: Berg, B Van den.]]
[[Category: Biswas, S.]]
[[Category: Beta barrel]]
[[Category: Outer membrane protein]]
[[Category: Porin]]
[[Category: Vanillate transport]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 22:18:38 2009''

Latest revision as of 12:17, 21 February 2024

Crystal Structure of the outer membrane protein opdK from Pseudomonas aeruginosaCrystal Structure of the outer membrane protein opdK from Pseudomonas aeruginosa

Structural highlights

2qtk is a 2 chain structure with sequence from Pseudomonas aeruginosa PAO1. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.8Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q9HUR5_PSEAE

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2qtk, resolution 2.80Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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