1nf2: Difference between revisions

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OCA

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-{{Seed}}
-[[Image:1nf2.png|left|200px]]
-<!--
+==X-ray crystal structure of TM0651 from Thermotoga maritima==
-The line below this paragraph, containing "STRUCTURE_1nf2", creates the "Structure Box" on the page.
+<StructureSection load='1nf2' size='340' side='right'caption='[[1nf2]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1nf2]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NF2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NF2 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-{{STRUCTURE_1nf2|  PDB=1nf2  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nf2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nf2 OCA], [https://pdbe.org/1nf2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nf2 RCSB], [https://www.ebi.ac.uk/pdbsum/1nf2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nf2 ProSAT], [https://www.topsan.org/Proteins/BSGC/1nf2 TOPSAN]</span></td></tr>
+</table>
-===X-ray crystal structure of TM0651 from Thermotoga maritima===
+== Function ==
+[https://www.uniprot.org/uniprot/Q9WZB9_THEMA Q9WZB9_THEMA]
+== Evolutionary Conservation ==
-<!--
+[[Image:Consurf_key_small.gif|200px|right]]
-The line below this paragraph, {{ABSTRACT_PUBMED_12824492}}, adds the Publication Abstract to the page
+Check<jmol>
-(as it appears on PubMed at http://www.pubmed.gov), where 12824492 is the PubMed ID number.
+  <jmolCheckbox>
--->
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nf/1nf2_consurf.spt"</scriptWhenChecked>
-{{ABSTRACT_PUBMED_12824492}}
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-NF2 is a 3 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NF2 OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nf2 ConSurf].
+<div style="clear:both"></div>
-==Reference==
+__TOC__
-<ref group="xtra">PMID:12824492</ref><references group="xtra"/>
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Thermotoga maritima]]
-[[Category: BSGC, Berkeley Structural Genomics Center.]]
+[[Category: Shin DH]]
-[[Category: Shin, D H.]]
-[[Category: Berkeley structural genomics center]]
-[[Category: Bsgc structure funded by nih]]
-[[Category: Had family]]
-[[Category: New fold]]
-[[Category: Phosphatase]]
-[[Category: Protein structure initiative]]
-[[Category: Psi]]
-[[Category: Structural genomic]]
-[[Category: Structural proteomic]]
-[[Category: Thermotoga maritima]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 19:52:40 2009''