1vxf: Difference between revisions

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-{{Seed}}
-[[Image:1vxf.png|left|200px]]
-<!--
+==NATIVE SPERM WHALE MYOGLOBIN==
-The line below this paragraph, containing "STRUCTURE_1vxf", creates the "Structure Box" on the page.
+<StructureSection load='1vxf' size='340' side='right'caption='[[1vxf]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1vxf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Physeter_catodon Physeter catodon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VXF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VXF FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-{{STRUCTURE_1vxf|  PDB=1vxf  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vxf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vxf OCA], [https://pdbe.org/1vxf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vxf RCSB], [https://www.ebi.ac.uk/pdbsum/1vxf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vxf ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/MYG_PHYMC MYG_PHYMC] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vx/1vxf_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vxf ConSurf].
+<div style="clear:both"></div>
-===NATIVE SPERM WHALE MYOGLOBIN===
+==See Also==
+*[[Myoglobin 3D structures|Myoglobin 3D structures]]
+__TOC__
-<!--
+</StructureSection>
-The line below this paragraph, {{ABSTRACT_PUBMED_8642596}}, adds the Publication Abstract to the page
+[[Category: Large Structures]]
-(as it appears on PubMed at http://www.pubmed.gov), where 8642596 is the PubMed ID number.
--->
-{{ABSTRACT_PUBMED_8642596}}
-==About this Structure==
-VXF is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Physeter_catodon Physeter catodon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VXF OCA].
-==Reference==
-<ref group="xtra">PMID:8642596</ref><references group="xtra"/>
 [[Category: Physeter catodon]]
-[[Category: Jr., G N.Phillips.]]
+[[Category: Phillips Jr GN]]
-[[Category: Yang, F.]]
+[[Category: Yang F]]
-[[Category: Conformational change]]
-[[Category: Oxygen storage]]
-[[Category: Ph value]]
-[[Category: Sperm whale myoglobin]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 18:23:30 2009''